KEGG   Nanorana parkeri (Xizang Plateau frog): 108784407
Entry
108784407         CDS       T04897                                 
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
  KO
K11643  chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108784407 (CHD4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:npr03036]
    108784407 (CHD4)
Chromosome and associated proteins [BR:npr03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108784407 (CHD4)
  Chromatin remodeling factors
   NuRD complex
    108784407 (CHD4)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT PHD DUF1087 Chromo ResIII HDA2-3 DEAD PHD_2 HMG_box
Other DBs
NCBI-GeneID: 108784407
NCBI-ProteinID: XP_018408706
Position
Unknown
AA seq 1895 aa
MASGHGPSSPGSDNEIEVMLNSGLHQDDDDLDDDLSEVETPKVKKKKKPKKARESKTPKG
KRQKKEDLEDSSGEGNDFGDDDLGTLRSDSEGSDYTPGKKKKKKLSQKKEKKQKVKPREE
DEDDDDDDSKEPKTSSQLLEDWGMEDIDHMFTEDDYRTLTNYKAFSQFVRPLIAAKNPKI
AVSKMMMVLGAKWREFSTNNPLKGSSGASVAAAAAAAEAVVASMVASTEVVAPPPPPPPP
PPPPAEVPLRKAKTKEGKGPNARKKPKVMRPPENKKTKAKKVAPLKIKLGGFGTKRKRSS
SEEEDLDVDSDYDEGSMNSMSVSDGSTSKSSRSRKKLRASKKKKKGEEEVTAGVVDGYET
DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMDKAPEGKWSCPHCEKEGVQWEAKEDN
SEEDDLDETVGDPEEEDHHMEFCRVCKDGGELLCCDVCPSSYHIHCLNPPLPEIPNGEWL
CPRCTCPSLKGKIQKILIWKWGQPPSATPAPKPAGAGLDAPPLKPLEGRAEREFFVKWQG
MSYLHCSWVTELQLELHCQVMFRNYQRKNDMDEPPAGDYGVDEEEKSRKRKNKDPKYLEL
EEKFFRYGIKPEWLMIHRVLNHSVDKKNNVHYLIKWRDLAYDQASWELEDADIQDYDIYK
QGYWNHRDLMCGEEGRPGKKIRKVKVRKMERPPDTPIVDPTVKYDRQPEFLDCTGGTLHP
YQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTII
NWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIRGGKKASRMKKEASVKFHVL
LTSYELITIDMAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNN
LEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPS
KTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPVA
AMEAPKMPNGMYDGSALIKGAGKLLLLQKMLRNLKDNGHRVLIFSQMTKMLDLLEDFMEH
EGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIYDSDW
NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKTG
SMSKQELDDILKFGTEELFKDEATEGKSCGENKEGEDISVIHYDDRAIDKLLDRNQDHQI
EDTEIQGMNEYLSSFKVAQYVVREEEMEEEEVVREIIKQEESVDPDYWEKLLRHHYEQQQ
EDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSAASEEGDEDFDERSEAARR
PNRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVR
DLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKV
QEFEHVNGRWSMPELAEAEENKKNSPADSPSPKTPTPSTPGDTQPNTPAPTPAIAEPPKT
EESAPKEEAPEAETKPPEENTESTQPAVAAAVAAAPTPTTESKSPAAPAEVKPEEAEKEE
KPPAAEPMETDLKAEADKSDDVIAVDDKKEEVPPVPLQNGETPKDAVEEKKKVVATKQRF
MFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLSGIITHGYARWQDIQNDV
RYAILNEPFKGEVNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSM
ALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPTTIA
RIPPVAVRLQMSERNILSRLASRTGEPQPQQMAQQ
NT seq 5688 nt   +upstreamnt  +downstreamnt
atggcttccggacatggaccttcctcccccggcagtgataatgaaattgaagtcatgttg
aacagtggccttcaccaagatgacgatgatttggatgatgacctctcggaagttgaaacg
cctaaagtaaagaaaaagaagaaacccaaaaaggcacgggaatccaaaacccctaaagga
aagcgtcagaaaaaggaggatctggaggacagctcaggggaaggaaatgattttggggat
gatgatctgggaacccttcgctcagacagcgagggcagtgattatacccctggaaagaag
aagaaaaagaagctgtcgcagaagaaagaaaagaaacagaaggtgaaaccacgtgaggag
gatgaagatgatgatgacgacgattccaaggaaccaaagacttcatcacaacttttggaa
gactggggaatggaggacattgatcatatgttcacggaggatgattacaggacattgact
aactacaaggctttcagtcagtttgtcaggcctctgattgctgcaaagaaccctaaaatt
gcagtttctaagatgatgatggttcttggagccaagtggagggaattcagcaccaacaat
ccattaaagggcagctctggggcatcagtggctgctgcagctgccgccgccgaggctgtg
gtcgccagcatggtagcctctacagaggtggttgctcctccaccgccgccaccaccgccg
ccaccacctccagctgaagttccattgcgcaaagccaagactaaggaaggaaaaggaccc
aacgccaggaagaaaccaaaggttatgcgtcccccagaaaataaaaagaccaaagccaag
aaggttgcccctctgaagatcaagcttgggggctttggtacgaaacgcaaacgctcctct
agcgaagaggaggaccttgatgtggactcggactatgatgagggcagcatgaacagcatg
tctgtatctgacggatccactagcaagagcagccgaagccgcaagaaacttagagccagc
aagaagaagaagaagggtgaggaggaagtaacagcaggtgttgttgatggctatgaaacg
gaccaccaggactactgtgaggtttgccagcaaggaggggagatcatcctctgcgatact
tgtcctcgagcataccacatggtttgcctggacccagacatggacaaggcacccgagggc
aaatggagctgcccgcattgtgaaaaggagggcgtacaatgggaagcgaaggaagataac
tctgaggaagatgacttggacgagaccgtaggtgaccctgaggaggaggatcaccacatg
gagttctgtcgagtgtgtaaggatggaggtgaactactgtgctgcgacgtctgtccttcc
tcctatcacattcactgtctgaacccaccactgccagagatacccaatggagaatggttg
tgcccaagatgcacatgtccatcattgaaaggaaaaattcagaaaatcctgatatggaag
tgggggcagccaccttctgccactcctgcgcccaaaccagcaggtgccggtcttgatgct
ccccctctgaaacctttggagggcagagcagagcgcgagttctttgtcaagtggcagggc
atgtcctatctgcattgctcttgggtgacagaactgcagctggagctgcactgtcaggtt
atgttcagaaactaccaacgaaagaacgacatggatgagcctcctgctggagattatgga
gtagatgaagaagagaagagccgcaagaggaaaaacaaagatccaaagtatctggaactg
gaagagaaattctttcgctatggtatcaagcctgagtggctaatgattcacagagtactg
aaccacagtgtggacaagaagaacaatgtacattacctgattaagtggagagaccttgca
tatgatcaggcatcttgggagttagaagatgcagatattcaggactatgacatatacaag
cagggttactggaatcacagggatctaatgtgtggtgaggaaggacgacctggcaaaaaa
attaggaaagttaaagtccgaaagatggagcgacctccagacaccccaattgtggatccc
acagtgaaatatgaccgccagccagagttcttggattgtactggaggaaccctgcacccc
taccagctagaaggattaaactggctgcgcttctcctgggcacagggcactgatactatt
cttgcagatgaaatgggtttgggcaagactgtgcagactgcagtattcttgtactctctt
tataaagagggtcactctaaaggtcctttcctggtcagtgcacccctttctaccatcatc
aactgggagcgtgaatttgagatgtgggctcctgacatgtacgttgtcacttatgttgga
gacaaggacagccgagccgtcattcgagagaacgagttttcgtttgaagacaatgcgatc
cgaggtggcaagaaagcttcacgcatgaagaaagaggcttcagtaaaattccatgtactg
ttgacatcatatgagctgattaccatagacatggctgtactgggctccattgattgggcc
tgtcttgtggtggatgaagctcatcgtctgaaaaacaaccagtccaagtttttcagagtt
ctgaatggctacagtcttcagcacaagttgcttctcacaggaacccccctgcagaacaat
ttggaggaattgttccatctgcttaatttcttgacgccagagcgcttcaacaacttggag
ggctttttggaggaatttgcagatattgccaaagaagatcagattaagaagctgcacgac
atgctgggtcctcacatgttgagaagattgaaggctgacgtgttcaagaatatgccctct
aagactgagctcattgtgcgtgtggagcttagccccatgcagaagaaatactacaagttc
atccttactagaaactttgaggctctgaatactcggggaggtggtaaccaagtatctctg
ctcaatgtggtgatggatctgaagaagtgctgcaaccatccatacctcttccctgtggct
gctatggaagcacccaagatgcccaatgggatgtatgatggcagcgccctcatcaaagga
gctgggaagctgctgctgctgcaaaagatgttgcggaacctgaaggataatggacacaga
gtgctcatcttttcccagatgaccaagatgttagacctgctggaagacttcatggagcac
gagggatataaatacgagaggatagacggtggaattaccggaaacatgcgtcaggaggcc
attgatcgctttaacgctcctggcgctcagcagttttgtttcctactgtccactcgtgct
ggaggtttgggaatcaatctcgccacagctgatactgtagtaatttatgactcggattgg
aaccctcacaatgatattcaggcgttcagcagagctcaccgtataggacaaaacaaaaag
gtcatgatctatcgattcgttactcgtgcctctgtagaagagaggattactcaggtagca
aagaaaaagatgatgctgacccacttggtggtaaggccgggtctcggttccaaaactggg
tcaatgtccaagcaggaactggacgatatcttgaagtttggtactgaggagctctttaaa
gatgaagcgacagaaggaaagtcatgtggtgaaaataaagagggtgaagacatcagtgtt
attcactacgatgacagagcaatcgataagctactggacaggaaccaagatcatcaaata
gaagacactgagattcaaggaatgaacgaatatctgagctcctttaaggtggctcagtac
gtcgtccgagaagaggagatggaggaagaggaggttgtccgtgagatcatcaagcaggag
gagagcgtggatccagactactgggagaagcttctccgccatcattatgagcagcagcag
gaggacctggcgcgaaatctgggcaaaggaaagagaatacgcaagcaagtcaattataat
gacggcagccaagaggacagagattggcaggatgatcagtccgataaccagtctgattat
tctgcggcatcagaagaaggcgatgaagactttgatgagcgatcagaagcagctcgtcga
cccaacaggaaaggcctgagaaatgacaaggacaaacctctccctccactactggctcgt
gtgggaggcaatatcgaggtattaggattcaatgccagacagagaaaggccttcttgaat
gccattatgcgctatggaatgccgcctcaggatgcctttaccactcagtggcttgtgaga
gatctgcgtggaaaatcagagaaggagtttaaggcatatgtgtcattgttcatgcgtcat
ctctgtgaacccggggcagatggggcggagacatttgcagatggagtcccaagagaaggt
ctatcccgccaacatgtgttaaccaggattggcgttatgtccctcatccgtaaaaaggtt
caagagtttgagcatgtgaatgggcgctggagtatgccggaactggcagaagcagaggag
aacaagaagaattctcctgctgactctccatcacccaaaactccaaccccgtctacacca
ggggatacacagcccaatacaccagctccaacccctgcaattgctgagcctccaaaaact
gaagagagtgctccaaaggaggaggccccagaagcggaaaccaaacccccagaggaaaat
acagagagcacacaacctgcagtggcagcggcagtggcagctgcaccaacacccacaaca
gagagcaaatctcctgctgccccggcagaggtaaaaccagaggaggcagagaaggaagag
aagcctccagcagcagagcccatggagacagacctgaaagcagaggcagataaatcagat
gacgtgatcgcggtggatgataagaaagaagaggtcccaccagtcccattacaaaacgga
gagacgcctaaagatgctgtggaggagaagaagaaggttgttgccaccaaacaaagattc
atgttcaacattgcggatggtggtttcacagagctgcactcattatggcagaatgaagaa
agagcagcaactgtaaccaagaagacgtatgagatctggcacagacgacacgattactgg
ctgctttctggcattataactcatggctatgcacgctggcaagacatccagaatgatgta
cgatatgccattctcaacgaacccttcaagggggaggtgaacagaggaaacttcctggag
atcaagaacaagttcctggcacggcgattcaagctcttagaacaagcgcttgtcatagaa
gagcagctaagaagagccgcctacctgaacatgtcagaagacccttcccacccttccatg
gctctgaacacaagattcgcagaggtggagtgtttggcagaaagtcaccagcacttatct
aaagagtccatggcaggaaacaagccagcaaatgccgttctacataaagtacttaagcag
ctggaggaactattgagcgacatgaaggccgatgtcaccagacttcccaccaccatcgcc
cgaattccacctgtggctgttcgactgcagatgtcagagaggaacattttgagccgactg
gcgagcaggaccggagaacctcaaccccaacagatggctcagcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (85)   

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