KEGG   Nanorana parkeri (Xizang Plateau frog): 108786392
Entry
108786392         CDS       T04897                                 
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:npr03016]
    108786392 (CDKAL1)
Enzymes [BR:npr01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     108786392 (CDKAL1)
Transfer RNA biogenesis [BR:npr03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    108786392 (CDKAL1)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TraT
Other DBs
NCBI-GeneID: 108786392
NCBI-ProteinID: XP_018411180
Position
Unknown
AA seq 576 aa
MPASCDSLLDDIEDIVSATDPKPHDRQSARQDVVPRVRKRNKNRIEEQPPSDSTIPGTQK
IWVRTWGCSHNNSDGEYMAGQLAAYGYSITESPEQADLWLLNSCTVKSPAEDHFRNSIKK
AQDENKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDN
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYSIEELVDRAKQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHIPIQSASDSVLMDMKREYCIADFKRVVDFLKERVPGITIATDIICG
FPGETDEDFKETLKLVEEYRFPSLFINQFYPRPGTPAAKMVQVPAHVKKQRTKELSQLFH
SYNPYDHKVGEKQQVLVTEESFDHQYYVAHNRFYEQVLVPKNPAFMGKMVEVDVYETGKH
YMKAKPLSESKMYTPSINKPLEKGEVSGLSEESKSLLKNGCLSKPKFSDARDKTSLHLAW
GDGGKQMKILYFIAAVIGVFIAFLGARIIHSEVVGN
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcctgcttcttgtgactcattacttgatgacattgaagacattgtctcagcaacagac
cctaagccacacgatcgtcagtctgcaagacaggatgttgttcccagggtccgtaaaaga
aacaaaaacagaattgaagagcagcctccaagcgacagcaccattccgggcactcaaaag
atttgggtacgcacatggggctgttcacataacaactctgatggagagtacatggcgggc
cagttggctgcatatggctacagtataacagagagtccagaacaagcagacctgtggcta
ttaaacagttgcacagtgaagagccccgcagaagaccactttaggaactcgataaaaaag
gcacaggatgaaaataaaaaagttgttttggctggatgtgtccctcaggctcaacctcgt
caagaatatctcaagggcctcagtataataggggtccaacagattgatcgagtagtagaa
gttgttgaagaaacaattaaaggtcattcagtgcgactgctgggtcagaaaaaggataat
ggaaaacggttggggggagctcgattggatttgccaaagattaggaagaacccactgata
gaaatcatttccatcaatacagggtgcctaaatgcatgtacctactgcaaaacaaaacat
gcacgaggggagcttgccagttattctatagaagaattggttgaccgggcgaaacagtct
tttcaagagggtgtttgcgagatttggctgaccagtgaagacacaggagcttatggtaga
gacattggcactgaccttccaacactcctatggaaactggttgaagttattcctgagggc
gcaatgctaagacttggcatgaccaaccccccctatattttagaacatctagaggaaatg
gcaaagattttaaaccatcctcgtgtgtacgcgtttctgcacatccccatacaatcggct
tcagacagtgtgcttatggatatgaagagagaatactgcatagcagacttcaaaagagtt
gtggatttcttaaaggagagagtgcccggaattacaattgctacggacatcatctgtggc
tttcctggagagacggatgaagattttaaggagacgttaaagctagttgaagaataccga
ttccctagcctcttcattaatcagttttacccgcgcccagggaccccagctgcgaaaatg
gtgcaggttccagctcatgtgaaaaaacagcggacaaaagagctgtcccaacttttccat
tcatacaatccatatgaccataaggtgggtgaaaagcagcaagttctagttacagaagaa
tcatttgatcaccagtactatgttgcccacaatcgtttttatgaacaggtccttgtgcct
aaaaacccagccttcatggggaagatggttgaagtagatgtatatgaaacaggaaagcat
tacatgaaggcaaaacctttgtcagagtcaaagatgtatacaccctccatcaacaagcct
ctagagaaaggagaggtttctggcttatctgaggagagcaagtcattgctgaaaaatggt
tgtctttcaaaaccaaagttttctgatgcacgtgacaagacctccctacatctagcctgg
ggtgacggtggaaaacagatgaagatactttactttattgctgcagtgataggagttttt
attgcatttctaggagcaagaatcattcacagcgaggttgtaggaaattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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