KEGG   Nanorana parkeri (Xizang Plateau frog): 108791728
Entry
108791728         CDS       T04897                                 
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108791728 (PARN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108791728 (PARN)
Enzymes [BR:npr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     108791728 (PARN)
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108791728 (PARN)
SSDB
Motif
Pfam: CAF1 RNA_bind R3H NCBP3
Other DBs
NCBI-GeneID: 108791728
NCBI-ProteinID: XP_018417791
Position
Unknown
AA seq 487 aa
MEITRINFKDQLPNVYQAIEESDFLAIDGEFSGISDGPSVSTLTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDNTVSKYITKSFNFYIFPKPFNRNSPDKKFVCQSSSIDFLVNQG
FDFNKVFRNGIPYLNQEEERQLREQYEEKRSQANGASAALYISPNTAKTPVSIPDEQKGF
VDKTVERVEAFMKDEEQKTIELEPCTGYQRKLIYQTLNWKYPRGTHLETVESEKKERYIV
ISKLDEDEILLQEELNDAVGFSRIIHAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELN
EFKEVTTCVFPRVLDTKLMATTQPFKEIIYNTSLAELEKRLKEAPFKPSKVGSPEGFPSY
STNSEQLHEAGYDAYITGLCFISMANYLGSFLSPPKGHISARSKIIRPFFNKLFLMRVMD
IPYLNLEGPDXXXXXPKRDNVLHVSFPKEWKTSDLYQLFSAFGNIQVSWIDDTSAFVSLS
KADQVQI
NT seq 1462 nt   +upstreamnt  +downstreamnt
atggaaatcaccaggatcaattttaaggaccagttgccaaacgtctaccaagctattgaa
gagtcagactttttggctattgatggggagttttcaggaataagtgatggtccatcagtt
agcactttaacaaatggctttgatacgccagaagaaaggtaccagaaactgaaaaagcac
tctatggacttcctgctgtttcagtttggtctatgcacttttaaatatgacaacacagtg
tcaaaatatattaccaaatcctttaatttttacattttcccaaagccattcaacagaaat
tctccagacaagaagtttgtttgtcagagctcaagtatagactttctggttaaccagggt
tttgattttaataaagtatttcgtaacggaattccatatttaaatcaggaggaggaacgt
cagctcagagaacagtatgaggagaaacgctcacaagcaaatggtgcaagcgcagcatta
tacatctctcctaatacagcgaagactccagtctccattcctgatgagcagaaaggtttt
gttgacaaaacagttgaacgtgtggaagcttttatgaaagatgaagaacagaaaactata
gaattggagccatgtacagggtatcaaaggaagcttatctaccagacgttgaactggaaa
tatccacgaggcacccatttagaaactgtcgaatctgagaagaaggaaaggtacattgtt
atcagcaaacttgatgaagatgaaattttattgcaggaagagcttaatgatgctgttggg
ttttcaagaattattcatgcgatttcaagctctggtaagcttgtggttggccataatatg
cttttggatgttatgcacacaatacaccagttcttttgtcagttacctgatgaattaaat
gaatttaaagaagtcacaacgtgtgtattcccacgagtactggataccaaacttatggca
acgacacaaccttttaaggaaattatttataacacatcccttgctgaattggaaaagaga
ttaaaagaggctccttttaaaccttcaaaagttggcagtcctgaaggctttccaagctac
agcacgaactctgagcaactacatgaagccggttatgatgcctacatcacaggactgtgc
tttatatctatggcaaactatctaggttcatttttgagtccaccaaaagggcacatatca
gcccgatcaaagatcatccgtccattttttaacaagctattcttgatgagggttatggac
attccttacctcaatctagaggggccagactnnnnnnnnnnnntgcctaaacgagacaat
gtcctccatgtatcttttccaaaagaatggaagaccagtgacctttatcaactattcagt
gcttttggtaatattcaagtgtcctggatagatgatacatcagcatttgtgtcactcagc
aaagccgatcaagtgcaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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