KEGG   Nanorana parkeri (Xizang Plateau frog): 108798447
Entry
108798447         CDS       T04897                                 
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
  KO
K13174  THO complex subunit 5
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108798447 (THOC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108798447 (THOC5)
   03041 Spliceosome [BR:npr03041]
    108798447 (THOC5)
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108798447 (THOC5)
Spliceosome [BR:npr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108798447 (THOC5)
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 108798447
NCBI-ProteinID: XP_018425703
Position
Unknown
AA seq 669 aa
MSSDTKKRKPKVIRSEEGKRNRHEEQEGRYYSEEAEVDLRDPKKDYQLYKETCEELQRLM
AEIQDLKSKGSKDASAEIEERRIKSCVHFMTLKKLNRLAHIRLKKARDQTHEAKQKVDAY
HLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVTVEEFYSEAPSEISKQDITSGDPHQQ
TLARLDWELEQRKRLAEKYKESLASKEKILKEIEVKKEYLNSLQPQLHNIMQASLPVQEY
LSMPFDCMHKQYEIARHLPAPLYVLFVQASAYSQACAHMKSYSQPYRQDKKLLVTIEGSV
EEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTFGVQLDDKRKEMLKKHPLSVSLVVKC
KDGSSLNLTFFFLMNLNILTVKAKITTTSELSSAISAGDLLNPDSVLSCLYPGDNGKKTP
NPANRYQFDKVGILALSDYISELGHPYLWVQTMGGLHFPTDQPQPTVVADNALSASHMEK
TVHLLRSRLQSRLSLHRQFASLEHGIIPISGDCQNLFPAKVVTRLTKWNVMPYEDYVVLP
YTKDVVEAGLALDTHLYFSLMIERGTAKLQGAVILNPGYCSVPPLFSLCLNWKGERSSRN
DENIRVMESEINVYYKELCGPSPGFQLLTNQLQRLCMLLDVYLETECHDNSVEGPHEFPP
EKICLRLVR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcttcagatactaagaaaagaaagccaaaggttattaggagtgaagaaggaaaacgg
aaccgtcatgaagagcaggagggacgatattatagtgaagaggctgaggtggacttgcgt
gatccaaaaaaggactaccagctatacaaggaaacctgtgaagaactacagagacttatg
gctgaaattcaggatcttaaaagcaagggcagcaaagatgcatctgcagaaattgaagag
aggcggattaagagctgtgtgcattttatgacactgaagaaactgaatcgtttggctcac
atcaggctaaagaaagccagagaccaaacgcatgaggccaagcagaaggtggatgcatat
cacctgcagttgcagaacttgctgtatgaagttatgcaccttcagaaggaaatcaccaaa
tgcctagagtttaaatctaagcatgaagaaattgagttagttactgtggaagaattttac
agtgaagctccatcagagatcagcaagcaagacataacttctggtgatccccatcaacaa
acattagctcgtttggactgggagcttgagcagaggaaaagattggcagagaagtacaag
gagagtttggccagtaaagagaagatactaaaagagatagaagtgaagaaggaatatctg
aacagtcttcagccacagcttcacaacattatgcaggcctcactcccggtccaggaatat
ttgtcaatgccatttgattgtatgcataaacagtatgagatagcacgccaccttccagca
cctctgtatgtactgtttgtccaggccagcgcctacagtcaggcatgtgcccacatgaag
agttactcccagccctataggcaggacaagaagctcctggtcaccatcgaagggagtgtt
gaagaggcaaaagctttgtttaaacctccagaagattcacaagatgatgaaagtgattct
gacgcggaagaggagcagacaacgaagcggagacgtccaacatttggggtacagctggat
gataagagaaaggagatgctgaagaaacatcctttgtctgtgtcccttgtagttaagtgt
aaagatggcagctctctgaatctgaccttcttcttccttatgaacctcaatatactcacc
gtaaaggcaaagattacaacaacatctgagctgtccagtgctattagtgcaggtgatctg
ctaaaccccgactctgtactcagctgcctctaccctggggataatggcaagaaaacccca
aatccagctaatagataccagtttgataaagtaggcatcctggcattgagtgactatatt
tcagagcttggtcacccttacctgtgggtacaaacaatgggtggtctacattttccaaca
gatcaaccacagcctacagttgtagcagacaatgctctaagtgccagtcacatggagaag
accgttcacttgctgaggtcccgtctacagtctcggctatctcttcacaggcagtttgca
tctctcgagcatggtatcattccaatttctggagattgccagaacctttttcctgccaaa
gtggtgacacggttaacaaagtggaacgtgatgccatatgaagattatgtggtgctccct
tacacaaaagatgtggtggaggcaggactagcactagatacccatctatatttttccctc
atgattgagagaggaacagccaaattgcaaggagccgtaattcttaatcctggttattgc
tcagttccaccattgttcagtctttgtctaaactggaagggagagcgcagttccagaaat
gatgaaaacatccgggttatggagagtgagatcaatgtctactataaggagctatgtggc
ccttctcctggctttcagttgctaactaatcagctgcagagactgtgcatgctgctagat
gtctatctagagacagaatgccatgataacagtgtggagggaccacatgaatttcctcca
gagaagatatgtctacgtttagtcaggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

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