KEGG   Nocardia seriolae: NS506_01477
Entry
NS506_01477       CDS       T04599                                 
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
nsr  Nocardia seriolae
Pathway
nsr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NS506_01477 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsr03400]
    NS506_01477 (mutM)
Enzymes [BR:nsr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     NS506_01477 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     NS506_01477 (mutM)
DNA repair and recombination proteins [BR:nsr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NS506_01477 (mutM)
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N zf-TFIIB Ribosomal_S13
Other DBs
NCBI-ProteinID: APA95548
UniProt: A0A1I9Z0V6
Position
1587894..1588760
AA seq 288 aa
MPELPEIVALEQFLAEHAVGAVVGRVDVAALSVLKTFDPPVTALQGRDVTGVGHWGKHLG
MDCDGLWLITHLSRGGWLRWIDEPGANPPKPGKGPLALRVHFFTPEGSTPAFDLTEAGTK
KRLAVWVTADPLSVPGIARLGPDALAVSEPEFAEILHGTSQRVKNALTDQTLLAGIGNAY
SDEILHTAKLSPFANSGTLDAEQLARLYSAMRASLSDAIQRSVGQDAARLKGEKRSGFQV
HARTGLPCPVCGDTVREVSYADKSFQYCPTCQTGGKILADRRMSRLLK
NT seq 867 nt   +upstreamnt  +downstreamnt
gtgcccgaattaccggaaatcgtggcgctcgagcagtttctggccgagcatgcggtgggc
gcggtcgtggggcgggtcgatgtggcggcgctgagtgtgctgaagaccttcgatccgccg
gtgaccgcgctgcaggggcgtgacgtgaccggggtggggcactggggcaagcatctcgga
atggattgcgacgggctgtggttgatcacccacctgtcgcggggcggctggctgcggtgg
atcgacgaaccgggagccaatccgccgaaaccgggtaaggggccgctggcgctgcgggtg
cacttcttcacccccgaggggtccacgcccgcattcgatctcaccgaggcgggcaccaag
aagcggttggcggtgtgggtcaccgccgacccgctctcggtgcccggcatcgcccggctg
gggccggacgccctggcggtgagcgaaccggaattcgccgagatcctgcacggcacctcg
caacgtgtgaagaacgccctcaccgaccagaccctgctcgcgggcatcggcaatgcctac
tccgatgaaatcctgcacaccgcaaagctttcccccttcgccaactccggcaccctcgac
gccgaacagctggcccgcctctactccgccatgcgagccagcctctccgacgccatccag
cgctcggtgggccaagacgccgcccgcctcaagggcgaaaaacgttccggcttccaggtt
cacgcccgcaccggcctaccctgccccgtctgcggcgacaccgtccgcgaagtctcctac
gccgacaagtccttccagtactgccccacctgccagaccggcggcaagatcctcgctgac
cgccgcatgtcccgcctgctcaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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