KEGG   Nocardia seriolae: NS506_05194
Entry
NS506_05194       CDS       T04599                                 
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
nsr  Nocardia seriolae
Pathway
nsr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NS506_05194 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsr03400]
    NS506_05194 (recB)
Enzymes [BR:nsr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     NS506_05194 (recB)
DNA repair and recombination proteins [BR:nsr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NS506_05194 (recB)
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 PDDEXK_1
Other DBs
NCBI-ProteinID: APA99240
UniProt: A0A1I9ZBJ7
Position
complement(5456775..5460386)
AA seq 1203 aa
MTDDLFSLTDPDLAPAPAPRTRRRSGSGAGEPRRESAAPEPVAADLFELPTATQAAGSDL
VAVTDEVPAGQGLWDDGAASGGIGEVAGSAVVHEDSGNRFELTGPLPVGTTVLEASAGTG
KTYAIVGLAVRFVAELGVDVSELLLVTFSRAATQELRERTRDRFVGVAAALGDPERALAS
GDELIRHLAQGNPGEIAARRERLLAALSDFDAGTIATTHSFCQRMLDELGLAGEQDPGAR
LVEGIEDVVSTVADDLYLSRYARAGAPFGPADAQRLAAAAVGDPHALLLPEAEGEGEGDP
AAERVGFAAAARVETARRKRLSGLRDFDDLLVLLHGVLADPEHGPLARRRIRDRYRVALV
DEFQDTDPLQWDILRRAFHGHATLVLVGDPKQAIYAFRGAEVLSYLDAVAHADAKRELTT
NRRSDAGLLAALEHLHGGAALGHKEITVHRVAATRPFSRLSGAPERVTPLRLRCLPRSGA
GPLNKSGYPTVGRQRERVAIDVAADIVGLLESGARIDAGTPGERPLGPGDIAVLVRNRNQ
LELVRAELEAAGVASVLAGGASVFGTAAATEWLWVLHALEQPHRADRVRLAAGTALLGLS
AADIDSGGADLVGRLSAELRDSARLFARAGFAAVAEKLAAETKLAPRLLALEGGERQLTD
LRQLAQLLDDAALRESLGLSALTRWLADRVRDPASGSVAGRSRRLDRDAAAVQIATVHAS
KGLEFPVVYLPFAWDAAKLRNPPTLLFHDEQGRRVLDVGGPDAPGYSARRLRAEAEEQAE
ELRLLYVALTRAGAQVIAWWAPSYDTQTAPLHRMLLGREPGSPAVADKVPVPADSVVLER
IREWAATAEPGVVAIEPVREFTRARLPVDDTATAAEPLAAAHFGRTLDQAWRRTSYSALT
AGAHDALPAADLPEGGGVADEPATPSVLADDLEILAGAAPSLMNSLPYGAEFGTLVHEVL
EYVDTDAPDLAAEIHARCLHAVGEQMFDADPDVLSGALLAVMHTPIGCGTLADFSTRDRL
SELDFELPLAGGDDPTAARVTVPRIAELWRRHVPADDIFAPYADQLAHLDDTPLRGYLTG
SIDAVLRTTGPRFLVVDYKTNRLGTGDLTVAHYTRDRMGAEMMRSHYPLQAILYSVALHR
YLRWRLPGYHPAEHLGGIRYLFVRGMIGPETPGGAGVFDWLPPPDLIVELSALLAGDTEV
LPR
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgaccgacgacctgttctccctcaccgacccggacctggcccccgccccggccccccgc
acccgccgccggagcggttccggcgcgggcgaaccccgccgcgagtccgccgcaccggag
cccgtggccgcggacctgttcgaactgccgaccgccacgcaggcggcgggaagcgatctc
gtcgccgtgaccgatgaggtgcccgccgggcagggcctgtgggatgacggtgcggcgtcg
ggcggtatcggcgaggtagccggttccgctgtggtgcacgaggattcggggaaccggttc
gagctgaccgggccgctgccggtggggacgacagtgctcgaggccagtgcggggaccggg
aagacctatgccatcgtgggtttggcggtgcgattcgtggccgagctgggggttgatgtc
tcggagttgctgctggtgaccttcagccgggcggccacccaggagttgcgggagcggacc
cgggatcggttcgtcggggtggccgcggccctgggagatccggagcgggcgctggcctcc
ggggacgagctgattcgtcatctggcgcaggggaatccgggggagatcgcggcgcggcgg
gaacgattgctggcggcgctgtcggatttcgacgccgggacgattgccacgacgcacagt
ttctgccagcggatgctcgacgagctgggactggcgggggagcaggatccgggcgcgcgg
ctggtcgaggggatcgaggatgtcgtctcgacggtggccgacgacctgtatctgagccgg
tacgcgcgcgcgggtgcgccgttcgggcccgcggacgcgcagcggctggccgcggcggcg
gtgggggatccgcacgcgctgctgctgcccgaggccgagggcgagggcgagggcgatccg
gccgcggagcgggtcgggttcgccgcggcggcgcgggtggaaacggcacgacggaaacgg
ctttcggggttgcgcgacttcgacgatctgctggtgctgctgcacggggtgctggccgat
ccggagcacgggccgctggcccgccgccgcatccgggaccggtaccgggtggcgctggtg
gacgaattccaggacaccgacccgttgcagtgggacatcctgcgccgggccttccacggc
cacgcgacgctggtgctggtcggggatccgaagcaggcgatctacgcgttccgcggggcc
gaggtgctcagctatctggacgcggtggcacacgcggacgccaagcgcgagctcaccacc
aaccggcgcagtgacgccggactgctggcggcgctcgagcacctgcacggcggagcggcc
ctggggcacaaggagatcaccgtgcaccgggtcgcggcgacgcggccgttctcgcggctg
tcgggcgcgcccgagcgggtgactccgttgcggctgcgctgcctgccacgcagcggggcc
gggccgctgaacaagtccgggtatccgaccgtgggccgccagcgcgaacgggtcgccatc
gatgtggccgccgatatcgtcggcctgctcgaatcgggggcgcgcatcgacgcgggcaca
cccggggagcggccgctcggaccgggcgatatcgcggttctggtccgcaaccgcaatcag
ctcgaactggtgcgcgccgaactcgaggccgccggtgtcgcctccgtactggccggtggc
gccagcgttttcggcaccgccgccgccaccgagtggctgtgggtgctgcacgcgctcgaa
cagccgcaccgcgccgaccgggtgcgcctggccgccgggaccgcgctgctgggtctgagc
gccgccgatatcgactccgggggagccgatctggtcggccgcctcagcgccgaactgcgc
gactcggcgcgcctgttcgcccgcgcgggcttcgccgccgtcgccgaaaagctggccgcc
gaaacgaaactcgccccgcgcctgctcgccctcgagggcggcgaacgccagctcaccgac
ctgcgccagctcgcgcaactgctcgacgacgccgccctgcgcgagagcctgggcctgtcg
gcgctcacccgctggctggccgaccgcgtccgcgacccggcctcgggcagcgtcgcgggc
cgcagccgccgcctcgatcgcgacgccgccgccgtgcagatcgccaccgtgcacgccagc
aagggcctcgaattcccggtcgtctacctgcctttcgcctgggacgccgccaaactgcgc
aacccgcccaccctgctgttccacgacgagcagggccggcgcgtgctggatgtgggcggc
cccgacgcacccggctacagcgcgcgccgcctgcgcgccgaggccgaggagcaggccgag
gaactgcgcctgctgtatgtggcgctgacccgcgcgggcgcccaggtgatcgcctggtgg
gcgccgtcctacgacacccagaccgcgcccctgcaccgcatgctgctgggccgcgaaccc
ggcagcccggccgtcgccgacaaggtgccggtacccgcggattccgtagtcctcgaacgc
atccgggaatgggcggcgaccgccgaacccggggtcgtcgccatcgaaccggtccgcgag
ttcacccgcgcccgcctgcccgtggacgacaccgccaccgccgccgagcctttggcggcc
gcccacttcggccgcaccctggaccaggcgtggcggcgcacttcctattcggcgctcacc
gcgggcgcgcacgacgccctgcccgccgccgacctgcccgagggcggcggcgtcgccgac
gaaccggccaccccgtcggtgctcgccgacgacctcgagatcctcgcgggagccgcgccc
tccctgatgaattcgctgccctacggcgcggagttcggcaccctggtgcacgaagtcctc
gaatacgtcgacaccgacgcccccgatctggccgccgagatccacgcccgctgcctgcac
gcggtcggcgagcagatgttcgacgccgacccggacgtcctctccggcgcgttgctggcg
gtcatgcacacgcccatcggctgcggcaccctggcggacttctcgacccgggaccggttg
agcgagctcgatttcgaactgccgctggccggtggcgacgacccgacggccgcccgggtg
acggtgccgcgtatcgcggagctgtggcggcgtcacgtgcccgccgacgacatcttcgcc
ccctacgccgatcagctggcgcacctggacgacaccccgttgcgcggctacctcaccggc
agtatcgacgccgtgctgcgcaccaccgggccgcgcttcctggtcgtcgactacaagacc
aaccgcctgggcaccggtgatctgaccgtcgcccactacacccgcgaccgcatgggtgcg
gagatgatgcgctcgcactatccgctccaggccatcctgtattcggttgccctgcaccgg
tatctgcgctggcggctgcccggctaccacccggccgagcacctgggcggcatccggtac
ctgttcgtgcgcggcatgatcggccccgagacacccggcggcgcgggcgttttcgactgg
ctgccgccgccggacctgatcgtcgaactctccgcgctactggccggagacacggaggta
ctgccaaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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