KEGG   Nocardia seriolae: NS506_07020
Entry
NS506_07020       CDS       T04599                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
nsr  Nocardia seriolae
Pathway
nsr00300  Lysine biosynthesis
nsr00470  D-Amino acid metabolism
nsr01100  Metabolic pathways
nsr01110  Biosynthesis of secondary metabolites
nsr01120  Microbial metabolism in diverse environments
nsr01230  Biosynthesis of amino acids
Module
nsr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nsr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NS506_07020
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NS506_07020
Enzymes [BR:nsr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     NS506_07020
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: APB01048
UniProt: A0A1I9ZGK4
Position
7347937..7349283
AA seq 448 aa
MTLREIFPSLRDGGMVPRLDPAIWPRETHYDGEGRITVGGVALAEIADQYGTPTYIMDEG
EVRGRCQAYRKRFPDAEIIYAGKALLTRAVAEWVTEEGLSLDVCSAGELAVALSSWADPA
RIVLHGNGKPFAELETAINCGVGRIVVDSQTEITCLSALANRPQRVLVRVTPDIDVHGHP
AVRTGVTDQKFGFPIGGQAVLEVVDRIVRQPNLELVGLHCHIGSQIYDTFPYGEAVRRMI
AEMARIRDEFGVTLTDLDLGGGHAVAYRSGDAEMNLAELADIIEDSLDAACARHGFPRPR
IALEPGRAIVARAGVTLYRVLSVKHVEDGHTYVTVDGGMSDNPRVALYGARYEAVVVNRH
PTGPQMTANIAGRYCEAGDILAHDVRLPADLRPGEVIAMPCTGAYHHSLASSYNGVGRPP
IVAVRDGRTRELVRRETIEDLLVRDIGV
NT seq 1347 nt   +upstreamnt  +downstreamnt
ttgacgctgcgcgagatctttccgtcgctgcgcgacgggggcatggtgccccggctcgac
cccgcgatctggccgcgggagacccactacgacggcgagggacgcattaccgtcggcggg
gtcgcactcgccgaaatagccgatcaatacggcaccccgacctacatcatggacgagggc
gaggtgcgcgggcgctgccaggcctaccgcaagcgcttccccgacgccgagatcatctac
gccggcaaggcgctactgacccgggcggtggccgaatgggtcaccgaggagggcctgtcg
ctggacgtgtgctcggccggggaactggcggtggcgctgtcctcctgggccgatccggcg
cgaatcgtgctgcacggcaacgggaaaccgttcgccgaactggagacggcgatcaactgc
ggggtcgggcgcatcgtcgtggattcccagaccgagatcacgtgcctgtcggcgctcgcg
aaccggccgcagcgggtgctggtgcgggtcacccccgatatcgacgtgcacgggcatccg
gccgtccgcaccggggtcaccgatcagaagttcggcttcccgatcggcgggcaggcggtc
ctggaggtggtggatcgcattgtgcggcagccgaatctggagctcgtcggcctgcactgc
catatcggctcgcagatctacgacaccttcccctacggcgaggccgtgcgccggatgatc
gccgaaatggcccgcatccgtgacgaattcggtgtcaccctgaccgatctcgatctgggc
ggcggccacgcggtcgcctaccgcagcggggacgcggaaatgaacctggccgagctggcc
gacatcatcgaggactccctggacgccgcctgcgcccggcacggattcccgcggccccgc
atcgccctggagcccggccgcgccatcgtcgcccgggcgggcgtcaccctgtaccgggtg
ctgtcggtcaagcacgtcgaggacggccacacctacgtgaccgtggacggcggcatgagc
gacaacccgcgcgtggccctctacggcgcgcgctacgaggccgtcgtggtcaaccggcac
cccaccggcccgcagatgaccgcgaacatcgccggtcgctactgcgaggccggtgacatc
ctcgcccacgatgtgcggctcccagcggatctgcgccccggtgaggtcatcgccatgccc
tgcaccggggcgtatcaccacagcctggcctcgtcctacaacggcgtcggccgcccgccc
atcgtcgcggtccgcgacggccggacccgggaactggtccgccgcgaaaccatcgaggat
ctgctggtccgggatatcggggtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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