KEGG   Nicotiana sylvestris (wood tobacco): 104234735
Entry
104234735         CDS       T05026                                 
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104234735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104234735
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     104234735
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII
Other DBs
NCBI-GeneID: 104234735
NCBI-ProteinID: XP_009786652
UniProt: A0A1U7XI81
Position
Unknown
AA seq 1173 aa
MDSGAASFPRRRTRQQWDRYFVEVIEKKKRLSQSGNPPQSSSNCSVNIGDDVVASGDIRE
SSSATGKLSKENTTCGVDNRKIGKWLEDESMVRSLDKGKKKMDNGNRMLSPGTCESMTKR
TFVQEISDDDDDDDDDDDDDDEEEEEEEEEEEEDSDPDVVVTGESAAVSALNSGSGSGSW
SNCVGLRSPIVTTADEVVSSTSSMCRTRGPSELHKSEEPTDFEESEDDCVKSQESSDDTT
ESSESESEASSDEDNDDPEDKDYRVNEPSSSSESDHDDDGVSCHIELQDNEEGKGSDIRI
GLDDDDDGRKETEDDDPVEQQENGEGKGESNEGLLPDLVFDGEKHRGRAYLLRPRSLSKS
KKRKLNHGNCSSPILLSDDEESESPFEEGTEAYDSTRDAAQKDKVDNLVKKVAEKEKEKA
DESVKNAAQKDRKTRKKCILKDLDFVKFVVDSIINVDDHDKLTSPVEKEQFPVKETLPLI
FRFEDEDPLPPEKEEWEKEIENLFAEMDMGILESCIGFTNPSLVEKVSGCQMGNHHLILD
EQIGLICKVCSHVHLESKYIYPAFAERNRGRHERKYFGESSPFLDVDGFRFDDPSAVHDS
AIYVEGTVWDLVPLHAKATMYPHQREGFEFMWKTIAGDIYLEKLSEPLSASRGGCIISHP
PGTGKTRLTIVFLQAFLKHFPKCRPVIIAPPKLLSNWEAEFQKWEADIPFHNLNNNDFSC
QEDEVTVGLYHCLSHAGRKNKHHIRMVKLKSWAKSKSILGISYDLFEKLTGENGDGYAKE
IREILLTLPGLVVLEEGHTPRNEQSLLYKAMTKVETQRRILLSGTVFQNNFKELYNTLRV
VSPKFAAESEQKWASLSNSIDTNARALEELRDMIAPLIHICSENVKMKSLPGIRDTLVYL
KPTDLQKKLLNMIPEYPGSFDFRNMVSLISVHPSLVANKKVFSDLESQLNERECRLDPNT
GVKTKFVVELIRLCDGMRERVIVFSQLLDPLRLIKEQLNSLFHWTLGREILYMDGELDVK
QRQKSISSLNDPKSDAKVLLASITACSEGINLIGASRVVLLDVHWNPSVEQQAVSRAYRN
GQTKFVHVYCPVASKWEVNKIEQQTRKKYHSGVLLSRNEANTCKTNPSCSVLEDNILESM
VQHESLRHIFEELPHEPRAYGFNSFNQPPKVSI
NT seq 3522 nt   +upstreamnt  +downstreamnt
atggattcaggggcagcctcttttccaaggaggaggactagacaacaatgggatagatat
ttcgtcgaggtaattgagaagaagaagaggttgagtcaaagtggtaatcctcctcagtct
tctagtaattgttctgtgaatattggagatgatgttgtagcttctggtgatataagggaa
tcatctagtgcaacaggaaaactgtctaaagaaaacacaacttgtggagttgacaacaga
aaaattggaaaatggttagaagatgaaagtatggtaagaagtttggacaaaggtaaaaaa
aagatggacaatgggaatagaatgctcagtccaggaacttgtgagtccatgacgaaacgg
actttcgtccaggaaatatctgatgatgatgatgatgatgatgatgatgatgatgatgat
gatgaagaggaagaggaggaggaggaggaggaggaggaggacagtgatcctgacgttgtt
gtcactggggagtctgctgcggtgtctgctttaaatagtggatcaggttcaggatcttgg
tccaattgtgttgggttaaggagtcctattgtcactacagcagatgaggttgtttcatct
acctcaagtatgtgtaggacacggggccctagtgagttgcataaatcagaggagccaact
gattttgaggaatcagaggacgattgtgtaaaatcacaagaatctagtgatgatacaaca
gaatcttctgagtcagagtctgaagcttctagcgatgaggataatgatgaccccgaagat
aaggattatcgggtgaatgagccatcaagttctagcgaatcagaccacgacgatgatggt
gtgagttgtcatatagagcttcaagacaatgaagaaggaaaaggatctgatataagaatt
ggtttggatgatgacgatgatggaagaaaggaaacagaagatgatgatcctgtagagcaa
caagaaaatggagaaggaaaaggggagtcaaatgaggggctactacctgaccttgttttt
gatggtgaaaagcacagaggccgagcatatcttcttcggccacgctcactttctaagtca
aaaaagaggaagttaaaccatggaaattgtagtagccccattcttctcagtgatgatgag
gagtctgaatccccatttgaagagggcacagaggcttatgactcaacgcgagatgctgct
caaaaggacaaagttgataacttggtgaaaaaggttgctgaaaaggaaaaggaaaaggct
gatgaatctgtgaaaaatgctgctcaaaaggacagaaagactcggaagaagtgtattctt
aaggatctcgactttgtgaagtttgttgttgattctataataaatgttgatgatcatgat
aaacttacttctcctgtagagaaggaacagtttcctgtcaaagaaacacttccgttgatc
ttccggtttgaagacgaggaccctctccccccggagaaagaagaatgggaaaaagaaatt
gagaatttatttgctgaaatggacatgggtatcttagaatcatgtattggcttcacaaat
ccatctctggttgagaaagttagcggctgtcagatggggaaccaccatcttattttagat
gaacaaattggactcatctgtaaagtttgttcacatgtgcatctggagagcaagtacatc
taccctgcttttgctgagagaaaccgggggaggcatgaaagaaagtatttcggagagtcg
tcaccgttcttggatgttgacgggtttagatttgatgatccttctgcagtccatgattct
gctatttatgtggaaggaactgtgtgggatttagttcctctgcatgccaaagcaacaatg
tatcctcatcaacgtgaaggatttgagttcatgtggaaaactatcgctggagatatatac
cttgagaagctgagcgagcctttatctgctagtaggggaggatgcataatctcacatcca
cctggaaccggaaaaacccgtctgaccatagtatttcttcaggcatttctgaagcatttt
ccaaagtgtcggcctgtaatcatagctccgcccaagttgctgtctaactgggaagccgag
ttccagaaatgggaggcggacattcccttccacaacttgaacaacaatgatttctcgtgc
caagaagatgaagtcacggttggtctctaccactgtttatcccatgccggaagaaaaaac
aaacaccatatacgtatggtgaagctgaaatcctgggctaaaagtaagagtatattgggg
atcagctatgacttgttcgagaagctcaccggagaaaatggagatggttatgccaaagag
attagagaaatacttctaacattacctggccttgtggtccttgaagaagggcatactcct
cggaatgagcaaagccttttgtataaagctatgactaaggttgaaacgcagaggcgtata
cttttgtctggaactgtcttccagaataactttaaagagttgtacaacaccctccgcgta
gttagtccaaagtttgctgcagaatctgagcagaaatgggcttctcttagcaattctatt
gacacaaatgcccgagcattggaagagcttagggatatgattgcaccactaatccatata
tgtagtgaaaatgtaaagatgaaaagccttccgggtataagggacacactggtatacttg
aagcccacagatttgcagaagaagttgctcaatatgattccagagtatccaggctcattt
gactttcgaaatatggtgtctctgatctctgttcatccttcattagtggcaaataagaag
gtgttctctgacttagaaagtcagctaaatgaaagagaatgtcggttggatccaaatact
ggagtaaaaacaaaatttgtcgttgaactaatccgactctgtgatggcatgagagagagg
gttatagtattcagccagttacttgatcctctaagactgatcaaggagcaactcaattct
ctctttcactggactttaggccgagagattctatatatggatggggaacttgatgtaaag
cagcgccagaaatcaataagttctcttaatgatcctaagagtgatgcgaaagtgctgctc
gcatcaataacggcctgttcggaaggaataaatcttataggagcctcaagagtagttttg
cttgatgttcactggaatccctcggtagaacagcaagccgtcagtcgagcctacaggaac
ggtcagactaaatttgtgcatgtttactgtccagtggcatcgaaatgggaggttaacaag
attgaacagcagacgaggaaaaaatatcattctggtgtacttttgtctaggaatgaagcg
aatacttgcaaaacaaatccttcttgttctgtgcttgaggacaacatactagaatccatg
gttcagcatgagagtctccgtcatatttttgaagagctacctcatgaaccccgtgcctat
ggctttaattcttttaaccaacctccaaaagtgagcatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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