KEGG   Nicotiana sylvestris (wood tobacco): 104235258
Entry
104235258         CDS       T05026                                 
Name
(RefSeq) cell differentiation protein RCD1 homolog
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104235258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104235258
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     104235258
SSDB
Motif
Pfam: Rcd1 DUF2249
Other DBs
NCBI-GeneID: 104235258
NCBI-ProteinID: XP_009787282
UniProt: A0A1U7X5A2
Position
Unknown
AA seq 317 aa
MANLPQSLSMLTAFGGGPGNTASASAAATQDRNKMQSAEQLVLELSNPDLRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQP
SSRLLKHIIRCYLRLSDNPRACDALRNCLPDMLRDATFSSCLREDPTTRRWLQQLIHNVN
GSRVALQAGGFDHLLVN
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcaaacctgcctcagtcactctcaatgctcaccgcctttggaggaggaccgggcaac
acagcctcggcatctgccgctgcaactcaggaccgtaacaaaatgcaatcagcagagcaa
ctcgtgcttgaactcagcaaccccgatcttcgagaaaatgcccttcttgaactttctaag
aagagggaattattccaggacttagccccattgctatggaactcatttggtactatcgct
gcgctcttacaggagatagtttccatctaccctgttttgtcaccgccaaacctgactcca
gcacaatctaatagagtttgtaatgctttagcacttcttcagtgtgtagcctctcaccct
gacaccagaatgttgttcctcaatgcacatattcctttgtatttgtacccttttctaaat
acaacaagcaaatcaagaccttttgaatatttgaggcttactagcttaggtgtcattggt
gcccttgtgaaggtagatgatactgaagtaatcagttttctactatcaacagaaataatt
cccttgtgtctgcgcacaatggagatgggcagtgaactgtcaaaaacggttgcaactttc
attgtgcaaaaaatacttctagatgatgtgggtctggattacatatgcaccacagcagag
aggttttttgcagtcggccgagttttagggagtatggtaggtgcacttgctgaacagcct
tcatcaagattactgaagcacataattaggtgctatcttcggttgtcagataatccaagg
gcatgtgatgcactaagaaattgtctccctgatatgcttagggatgccaccttcagtagt
tgtcttcgtgaggatcctacaacgaggaggtggctacagcaattgattcacaatgttaat
ggtagccgtgttgctctacaggcaggaggatttgatcatttgctggtgaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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