KEGG   Nicotiana sylvestris (wood tobacco): 104247532
Entry
104247532         CDS       T05026                                 
Name
(RefSeq) structural maintenance of chromosomes protein 3
  KO
K06669  structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104247532
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:nsy00535]
    104247532
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    104247532
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    104247532
Proteoglycans [BR:nsy00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   104247532
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_15 AAA_23 DOT1 AAA_29
Other DBs
NCBI-GeneID: 104247532
NCBI-ProteinID: XP_009801877
UniProt: A0A1U7YCM6
Position
Unknown
AA seq 1201 aa
MYIKQVIIEGFKSYREQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQAFLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIFDKELHDARQKLN
EVEEARTKIAENSTEKYNSVLEAHEKSKELEKLSKDLTKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLMLLEREIQETKNALNDIKPLHEKQVKEEED
ITRGIMDSEKKLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSNVTQERKLRDEI
DQLKKDMRDQDDIIKHRRVEMDKKEILISGYRNAYNQYKVERDKMHDERKSLWTQETELT
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLVCDEKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKAPHVNYPNSSDVIPL
VKKLTFSDVYEKAFKQVFARTVICKDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLRFMSTIKQNIVSINLKERELEEVRYKLQEIDQKINELVAEQQKNDAALAHDKS
ELEQLKQDIGNAERQRQSILKALQKKEKLLDNILSQIDQLRASIAVKQDEMGTELVDHLT
PEERDSLSRLNPEITTLKEKLIACRANRIETETRKEELEMNLSTNLERRKQELVAMNSSV
DVDMLQGEVESKNQELKDAESLVDHVTEELTRVSGSIDERNKRLKKIKQDKDKLKTLEDE
YQNTLQDEARELEQLLSKRNTCLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKILH
KCNEQLKQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEDDDNDPDDDEPRADMEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYGVIHKNRVSRVNVISRDDALDFIEHDQSH
N
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgtatataaaacaggtcattatcgaagggtttaagagctaccgggaacaagtagccact
gaagattttagtcctaaagttaactgtgttgttggcgcgaatggatctggcaagtctaac
tttttccatgcaatccgttttgttgtaagcgacctctttcataacctgcgcagtgaagaa
aggcaggcttttcttcatgaaggagcaggtcaccaagtattatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtgcgactgcgaaga
acaatcggtctcaagaaggatgagtattttttggacggaaaacatatcacgaagacagag
gtccagaatttgctggaaagtgctgggttctctcgttctaatccctattatgttgtgcag
cagggaaagatagcatcattgacgttaatgaaggattcagaacgacttgatctgctgaag
gaaattggagggacacgtgtttatgaggagaggcgtcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaattattcaagttgtacaatacttggatgagagattg
aacgagcttgaacaagagaaggaggaactgaaaaaatatcaacagcttgacaagcagcgt
aaatctctggaatacacaatttttgacaaagaacttcatgacgcacgccagaaattgaat
gaggtagaagaggctcggaccaaaattgctgagaactctactgagaagtataatagtgtg
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctgacaaaagaa
attcaaattttaagcaaggagaaagaagctgtagagaaacagcggacagaggctatcaga
aagcgagctaagcttgatcttgattacaaagaccttcaagagaagatgtctacaaatatt
aaagctaaagatgatgcacagaaacaactcatgcttcttgaaagagaaattcaggaaaca
aagaatgcactcaatgatatcaagcctttgcatgagaaacaagtaaaagaggaggaggac
atcactagggggattatggatagtgaaaagaaacttagcattctttatcagaaacaaggc
cgtgccacccaatttgcaagcaaagctgccagggacaaatggctacagaaggaaattgat
gaatatgaacgagttttatcttcaaatgtaacacaggagagaaagcttagagatgaaatt
gatcagctcaaaaaagacatgagagatcaagatgatataatcaagcatcgtagagttgaa
atggacaaaaaagaaatcctcatatctggctatcgaaatgcttataatcagtataaagtg
gagagagacaagatgcatgatgagaggaagtccttgtggacacaggaaaccgagctcact
actgaaattgaacggctcaaggctgaagttgtgaaggcagaaaaaagcctagatcatgca
actcctggtgatatcagaaggggtctgaattctgtgaggaggatatgcagagagtatgaa
atctctggagtatttggcccgatttttgagttgcttgtatgtgacgaaaagttttttacg
gctgttgaagttactgctggaaacagcttattccatgtggtggttgataatgatgaaaca
tcaactaaaattattagacacctcaatgcacaaaaaggtggacgagttacatttattcca
ttgaacagggttaaggctccacatgttaattatccaaatagctctgatgtgattccgctt
gtgaagaaattgacgttttctgatgtatatgaaaaagcatttaagcaggtgtttgcaaga
acagtaatttgtaaagatctggatgttgctaccagggttgctcgtactgatgggcttgac
tgcattactcttgaaggtgaccaagttagtaaaaaggggggcatgaccggtggattttat
gactatagacgctcaaaattgaggtttatgagcaccatcaaacagaatatagtgtccatc
aacctgaaggagcgtgaacttgaggaagttagatataaacttcaagagatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctgccctggctcatgacaagtct
gagttagaacaacttaaacaagatattggtaatgctgaaagacagagacaatccatctta
aaagctcttcaaaagaaggagaaactgcttgataatattttgagtcaaatagatcagcta
agagctagtatagctgtgaaacaagatgaaatgggaacagaacttgttgatcatttaaca
ccggaagagcgagattctttgtcacgcttgaaccctgaaattacgactctgaaggagaag
ctgattgcgtgcagggcaaatcggatagagactgaaaccagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaaacaagagttagtggcgatgaattcttctgtc
gacgttgatatgttacagggtgaagttgagagcaagaatcaggaacttaaggatgcagag
tcactagttgaccatgtgactgaagagcttacaagggtttctggaagtatagatgaacga
aacaagaggctcaagaagattaaacaggacaaggataagctgaagactcttgaagatgag
tatcagaatacacttcaggatgaagcaagagaattggagcagctactaagtaaacggaac
acttgtctcgccaagcaagaagagtactcgaagaaaatccgggaactgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaatgtaaaagaattatacaagatactgcac
aagtgtaacgagcagctgaaacaattcagccatgtaaacaaaaaagcacttgatcaatat
gtaaatttcaccgagcaaagagaagaactccaaagaaggcaagctgaattagatgctggt
gatgagaaaatcaaggaacttatatcagttttggatatgaggaaggatgaatcaattgag
cgcacgttcaagggtgtggctaaacatttccgtgaagtattctctcaactcgtgcaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggcgaggacgatgacaatgatcct
gatgatgatgagcctcgtgctgatatggagggaagggttgagaaatatattggtgtgaaa
gtgaaggtgtccttcactggacaaggagaaacacagtcaatgaaacagttatcaggtggt
cagaaaactgtggtagcgctggcacttatatttgccatacaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcaatacagaacagccgtgggg
aatatggttcgtgatttggcagacaggggcagcacacaatttattacgacgacattccgg
ccggagcttgtgaaagtggctgataagatatatggtgtgatacacaaaaatagagttagc
cgtgtcaacgttatctccagggacgatgccttagattttattgagcatgatcaatctcat
aactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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