KEGG T04643: 107760187

Nicotiana tabacum (common tobacco): 107760187

Entry

107760187         CDS       T04643

Name

(RefSeq) E3 ubiquitin protein ligase RIN2-like

K10636

E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]

Organism

nta Nicotiana tabacum (common tobacco)

Pathway

nta04141

Protein processing in endoplasmic reticulum

Brite

KEGG Orthology (KO) [BR:nta00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107760187
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nta04121]
    107760187
Enzymes [BR:nta01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     107760187
Ubiquitin system [BR:nta04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107760187
  Multi subunit Ring-finger type E3
   ERAD complex
    107760187
   LMBR1L-GP78-UBAC2 complex
    107760187

SSDB

Motif

Pfam:

zf-RING_2 zf-C3HC4 zf-rbx1 CUE zf-RING_UBOX zf-C3HC4_2 zf-ANAPC11 zf-C3HC4_3 zf-RING_11 zf-RING_5 zf-RING_16 zf-C3HC4_4 PHD E3_UbLigase_EDD RINGv Kazal_1 zf-HC5HC2H

Other DBs

NCBI-GeneID:

107760187

NCBI-ProteinID:

XP_016433688

UniProt:

A0A1S3X192

Position

AA seq 581 aa
MGVSYLSISAFCTALSYVGLQCWMGISVQKLKADGLIGESIINFGNESRALETLLGSQTT
IALGANFAVNIFILLVLCLKTIFFGDLHSPEIRKLVERLINYVISKGTFLPLVVPPTLYQ
AGLWSTWLVVLCFLKMFQALARDRLERLNASPSATPWTYFRVYSALLLVFSANLLWMRVC
LVVYRTISSSVFLLLFFEPLSIAFETLQAILVHGFQLLDIYIHDSANDISNSRISKLFDI
SAAGSFGEWKGILIRNMGFLLDMMTLLMALAHYVHIWWLHGMAFHLVDAVLFLNIRALLS
AIVKRVKGFIKLRIALGTLHGALPDATLEELQTYDDECAICREPMAKAKKLSCNHLFHLS
CLRSWLDQGLTENYSCPTCRKPLFIGRSENEVNPHTADVRGDELLAREMSMGLDRLNLPG
HALPNEVSRNQTHNPLESSDWRGSGIDSGWLGLDDAGPSTSIRSGGLGRVQTVMRHLAAV
GETYAQTALEDAAWNLWSMRASQAGTSSSAIPPAGNVRHVGGAGGLHLRTPSRATNNNVS
NIYTMVETVREVLPHIPDEIILEDLQRTHSVTVTVNNLLHM

NT seq 1746 nt +upstreamnt +downstreamnt
atgggcgtaagctacttgtcaatttcagcattctgcactgctctgagctatgttggactc
cagtgttggatgggaatttcagttcagaaactaaaagcagatgggctcattggggagagt
attatcaactttgggaatgaaagccgtgcattagagactcttttaggttcacagaccaca
attgctttgggagccaattttgcagttaacatatttatcctactggttttgtgtcttaag
acaatattctttggagatttgcactcaccagaaatacgaaagctggttgagcgcctcatc
aattatgttatttccaagggaacttttcttccattggtagttccaccaacgctgtatcaa
gcaggcctatggtcaacgtggcttgttgttctttgctttctaaagatgtttcaagcttta
gctagggatcgacttgaacgactgaatgcctctccttcagctactccctggacatacttc
cgtgtgtattctgccttattgctggttttctcagccaacttactctggatgagggtgtgc
ctggttgtatatagaacaataagttcatccgtgtttttgttattgttctttgagcctctt
agcattgcatttgagacgcttcaggctattcttgttcatggattccagttgctcgacata
tatatccatgactcggcaaatgatatttcaaatagccgaatatccaagctctttgacata
tctgctgcaggctcatttggggaatggaaaggcattcttattcggaatatgggttttctc
ctagacatgatgactctgttgatggctctcgctcattatgtgcacatatggtggctccat
ggcatggcgtttcacctagtggatgcagttcttttcctaaatatccgtgctttattgagt
gctattgtaaaacgtgtcaaagggttcattaaactgagaatagcattgggcacacttcat
ggtgcacttcctgatgcaactttggaagagctacagacttatgatgatgaatgcgctatt
tgtagggaaccaatggcaaaggcgaaaaagctatcttgtaatcatcttttccatctttca
tgcttgagatcttggttagatcaaggcttaactgaaaattattcatgtcccacttgccgg
aagccgttgtttataggcagaagcgagaatgaggtaaatcctcatactgcagatgttcgg
ggtgacgagctgcttgctcgtgagatgagtatggggcttgatcggttgaatcttcctggt
catgcacttccaaatgaagtttcccgcaatcaaacgcacaaccctcttgaaagcagtgat
tggaggggttcgggaattgattcaggttggttgggcttagatgatgctggaccatctaca
agcatcagatcagggggactgggtcgagttcagacagtgatgaggcatctcgcagctgtt
ggagaaacatacgcacaaactgctctagaagatgctgcctggaacctttggtctatgcgt
gcctcccaagctggtacttccagttcagcaatccctcccgcaggtaatgtgaggcatgtc
ggaggtgctggagggttgcacttgaggacaccctcacgtgccacaaacaacaatgtatcc
aacatatatacaatggttgaaactgttagagaagtgctgccacacatacctgatgaaatt
attcttgaggatttacaacgaactcactcggtgactgttactgtgaataatcttctgcac
atgtga

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