KEGG   Nicotiana tabacum (common tobacco): 107769964
Entry
107769964         CDS       T04643                                 
Name
(RefSeq) cell differentiation protein RCD1 homolog
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107769964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107769964
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     107769964
SSDB
Motif
Pfam: Rcd1 DUF2249
Other DBs
NCBI-GeneID: 107769964
NCBI-ProteinID: XP_016444709
UniProt: A0A1S3XXW2
Position
Un
AA seq 326 aa
MANLPQSFSIGVGGFGSGGAAASSSSSVGAPADKDRKMQSAEQLVLDLSNPDLRENALLE
LSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVA
SHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLST
EIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICATAERFFAVARVLGNMVGALA
EQPSSRLLKHIIRCYLRLSDNVRACDALRNCLPDMLRDTTFSSCLREDPTTRRWLQQLIH
NVSVPRVSLQAGGFDHMLVNSLSSHN
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcaaacctacctcagtctttctcaatcggcgttggcggtttcggtagcggcggagcg
gcagcatcctcttcctcttcagtcggagctccggcggataaggatcgcaaaatgcaatcc
gctgaacagcttgtgcttgatctcagcaatcctgatcttcgagaaaacgctcttctagaa
ctttccaagaagagggaactgttccaggatttggcccccttgttgtggaactcatttggt
actatcgctgcactgctacaggagatagtttccatctaccctgttttgtcaccaccaaac
ctgactcctgctcaatccaatagagtttgtaatgcactagcacttcttcagtgtgtagcc
tctcaccctgacaccagaatgttgttcctcaatgcgcatattccgttgtatttgtaccct
tttcttaatacaacaagcaagtcaagaccttttgaatatctgaggcttactagcttaggt
gtcattggtgccctggtgaaggtagatgacactgaagttatcagctttctcctatcgaca
gagataattcccctgtgcttgcgtacgatggagatggggagtgaactgtcaaaaacagtt
gcaactttcattgtgcaaaaaatccttcttgatgatgtgggtctggattacatctgtgcc
acagctgagaggttttttgcagtagcccgagttttagggaatatggttggtgcactcgct
gaacagccttcatcaaggctgctgaaacacataattaggtgctaccttcgtttgtcagat
aatgttagggcatgtgatgcactgagaaattgtcttccggatatgcttagagataccacc
ttcagcagctgtcttcgtgaggatccaacaacgaggaggtggctacaacagttgatccat
aatgttagtgtgcctcgggtttctttgcaggctggaggttttgatcatatgctggtgaac
tcattgagttctcacaattag

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