KEGG   Nicotiana tabacum (common tobacco): 107789704
Entry
107789704         CDS       T04643                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03020  RNA polymerase
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107789704
  09124 Replication and repair
   03420 Nucleotide excision repair
    107789704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107789704
   03400 DNA repair and recombination proteins [BR:nta03400]
    107789704
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     107789704
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107789704
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 107789704
NCBI-ProteinID: XP_016467048
UniProt: A0A1S3ZRY0
Position
Un
AA seq 318 aa
MEGVSYQRFPRIKIREVKDDYMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV
TSKDLLSSDHTVVPVDYSDASSGFDNSTNKGIIIVKLRRGQELRLRAIARKGIAKDHAKW
SPAATVTFMYEPDIYINEDMMETLTLEEKRELVDSSPTKVFGIDPENKVIVVDAEAYTYD
DEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSDD
TVEADDQFGELGAHMRGG
NT seq 957 nt   +upstreamnt  +downstreamnt
atggagggcgtctcgtaccagagattcccaaggatcaaaatccgtgaagttaaagacgac
tacatgaaattcgagctgcgcgacaccgacgccagcatagccaacgcgcttcggcgcgtg
atgatagcagaagtcccaactatcgccattgacctcgttgaaatcgaggtcaattcctcg
gtcctcaacgacgagttcatatctcatcgtctgggtctcatcccgctcactagcgagcgc
gcaatgagcatgcgtttctcccgtgactgtgacgcgtgtgacggtgacggacagtgcgag
tattgttccgttgagttttacctccgtgtcaagtgccttagtgaccagacgctcgatgtt
actagcaaagatttgttgagttcggatcatactgttgttcctgtcgattattccgatgct
tcctccggttttgataattctaccaataagggaatcataattgtgaaactacgacgtggg
caggagttaaggttaagagcaatagcacggaaaggaattgctaaagatcatgcgaaatgg
tctcctgcagcaactgtgactttcatgtatgaaccagatatctacatcaatgaggacatg
atggagaccttgactctcgaggagaaaagagaattagtagacagtagtcccacaaaagtc
tttggcattgatcctgaaaacaaggttattgtagttgatgctgaggcatacacttatgat
gatgaggtgcttaagaaatgtgaagccatgggaaaacctggacttatagagatacatgcc
aaggaagatagttttattttcactgttgaaacgactggcgcagtgaaagcttcacaattg
gtactcaatgcaatagaagtgctgaagcagaaattggatgcagtacgcctttcagatgac
accgtggaagcagatgatcagtttggagagttgggtgcacatatgcgcggagggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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