KEGG   Nicotiana tabacum (common tobacco): 107796022
Entry
107796022         CDS       T04643                                 
Name
(RefSeq) WD repeat-containing protein 43-like
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107796022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nta03009]
    107796022
Ribosome biogenesis [BR:nta03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    107796022
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 PQQ NBCH_WD40 PQQ_2 Cytochrom_D1
Other DBs
NCBI-GeneID: 107796022
NCBI-ProteinID: XP_016474218
UniProt: A0A1S4AC90
Position
Un
AA seq 604 aa
MGTTNIRDILTCLSPSLDFFAISSGDGRIKIWDTVKGQVQTEFADIVSTETTASLFTKPG
GHLSMDYTCMKWLSCDRKKKRKLGTSLLVLGTGSGDVLALDVSAGHLKWRFTDCHPGGVN
AISFPSHGSFIYTAGADGLVCKIDSMSGNLLHKFKASTKAISSLSVSSDGKILATATSQL
KIFNCLDDKKLQKFSGHPGAVRCIVFSEDGRHVLSSAVGDRHVAVWKLDGSKRKSACCLL
PMDHPAVFLDSYCIKSGVENDASLGVLAISEIGVCYFWHGKSFEELHNLKPTKICASLDE
KILKKHKEAVHSIFSAKLQSIGTSGSGHMFVAYGLLIKPSFEKVMVQPGADIRLKSSLDG
ILLPFSQSRKSKQASNTQSQVTALDCANAEGALLPLPKILDQVGVEHGIKPTVSKDVIGK
HGEDEVTICMEDQLRSIGIISSDYDLSPSSILDPKILKGISVDASMPPKKMKSAVLSLES
PDAYNLLNALVAAWQSRSSIGRHVLPWIYCILVNHNEFVTSQEPLTPLLDSLNKLTRSKV
AALSSLLQLSGRLQLVMAQVEKADNRKSPALTLEGQMDESEDDEVDEVMYGIDEESQTSS
DGDD
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgggcacaacaaatataagggacattttgacttgtttgagtccctctttggacttcttt
gctatcagttctggtgatggccgtatcaagatatgggatacagtgaagggtcaggtacag
acggagtttgcagatattgtgtcaactgagacaacagcaagcttgtttactaagccagga
ggtcatctttctatggattatacttgcatgaagtggttatcatgtgacagaaagaaaaaa
aggaagcttggaacttcattattggttttaggtacaggcagtggtgatgttttggctcta
gatgtatctgcaggtcatctcaaatggagatttactgattgccatcctggcggtgtcaat
gccatctcattcccttcacatggttcattcatttacacggctggtgctgatggactggtt
tgcaaaattgactccatgtcggggaacttattgcataagtttaaagcttccactaaagca
atatcatctttatcggtttcgtcagatgggaaaatattagcaacagcaacttctcagttg
aagattttcaattgcttggatgacaaaaagctccagaagttttcaggccaccctggggct
gttcggtgtatagttttctctgaagatgggagacatgttctttcttctgctgttggtgac
cgacacgtagcagtttggaagttggatggtagcaaaaggaaatcagcgtgctgcttgctt
ccaatggatcaccctgctgtctttttggatagttactgcattaaatctggagttgaaaat
gatgcaagtttaggtgttttggccatttcagaaattggtgtttgctacttttggcatgga
aagagttttgaggaattgcacaatttgaagcccacaaaaatatgcgcatctttagatgag
aaaattctgaagaaacataaagaagccgtgcatagtattttttcagcaaaattgcaatct
attggcacatctggttccggtcatatgtttgttgcatatggcttgttaataaaaccatca
tttgaaaaagttatggtgcagcctggggcggatatcagattaaaaagttcacttgacggg
atccttctacccttcagtcaatctcgcaaatctaaacaagcatctaacactcagagtcag
gttactgctcttgattgtgcaaatgcagagggtgccttacttcctttgcctaagattctt
gatcaggttggtgtcgagcatggaattaagcccacagtaagcaaagatgtcattggtaaa
catggtgaagatgaggtcacaatttgcatggaggaccagttaagatccataggtataatt
agcagtgactatgatctctcgcctagctcaattcttgatcctaagattttgaaaggaata
agtgttgacgctagtatgccaccgaagaagatgaaatcagctgttttatctttggagtcg
cctgatgcttacaatttattgaatgccttggtggctgcatggcagtccagatcaagcatc
ggaagacatgttcttccatggatatactgtatattggtgaaccacaatgaatttgttaca
tcgcaggaaccactgactcctcttctggattccttgaacaagcttaccaggtcaaaggtg
gcagccctgagctctttattgcagttatctggccgtttgcagctcgtaatggcacaggtt
gagaaggctgataataggaaaagccccgcgctaactctcgaggggcagatggatgaaagt
gaggatgatgaggtagatgaagttatgtatggcatagatgaagaatctcaaacaagcagt
gacggagatgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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