KEGG   Nicotiana tabacum (common tobacco): 107796898
Entry
107796898         CDS       T04643                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03020  RNA polymerase
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107796898
  09124 Replication and repair
   03420 Nucleotide excision repair
    107796898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107796898
   03400 DNA repair and recombination proteins [BR:nta03400]
    107796898
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107796898
  RNA polymerase III system
   RNA polymerase III
     107796898
  RNA polymerase I system
   RNA polymerase I
     107796898
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107796898
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 107796898
NCBI-ProteinID: XP_016475206
UniProt: A0A1S4AEY9
Position
Un
AA seq 166 aa
MLFSVLRKVNFLFGGFAVKMDAFHFDDVIKVHKVNFNGSKYDKVSRIEAESQDGNTFCQL
VIIRELYSVHPNELYRMVISEVDKDNPDESDFAGYLPEGKQKSPADQFEFIMQGKVYNVS
TDTSGSDTKAVVHISFGGLQFMLKSDPAKLQRFKRGQRILLLMTKL
NT seq 501 nt   +upstreamnt  +downstreamnt
atgctcttctccgttttaagaaaggttaattttctgtttggagggtttgctgtgaaaatg
gatgcttttcactttgatgacgttatcaaggttcataaggtgaattttaatggcagtaag
tatgacaaagtttctcgcatagaagcagaaagtcaagatggaaacacattttgccagcta
gtgatcatccgagagttatattctgttcatccgaatgaattgtataggatggttatttca
gaggtagacaaagacaatcctgatgagtcagattttgctggctatcttcctgagggaaag
cagaaatcacctgcggaccaattcgaattcatcatgcaagggaaagtgtataatgtctca
acggatacatcaggatctgacactaaagcagtggttcatatctcctttggtggacttcag
tttatgctgaaaagtgacccagccaagttgcaaaggtttaagcggggccagaggatcctt
cttcttatgacgaagctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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