KEGG   Nicotiana tabacum (common tobacco): 107798186
Entry
107798186         CDS       T04643                                 
Name
(RefSeq) 30S ribosomal protein 2, chloroplastic-like
  KO
K13126  polyadenylate-binding protein
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03015  mRNA surveillance pathway
nta03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107798186
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107798186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107798186
   03041 Spliceosome [BR:nta03041]
    107798186
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107798186
   mRNA cycle factors
    Stress granule specific factors
     107798186
Spliceosome [BR:nta03041]
 Complex C
  Other components
   Complex C specific factors
    107798186
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 RRM_7 mRNA_decap_C
Other DBs
NCBI-GeneID: 107798186
NCBI-ProteinID: XP_016476639
UniProt: A0A1S4AJ51
Position
Un
AA seq 243 aa
MSTLSSFTISPTFLHNPRNRNRNSSIQLPNLSLKPQTARVCLSTRMNAVEEEEISVSTAD
PSSEAARRLYIGNIPRTLKPDELRKIVEEHAAVEKAEVMYDKYSGRSRRFGFVTMTTIED
ASAAVEKLNGTEIGGREIKVNITEKPLSSVGSSLLQSDDSKFVDSPHKVYVGNLAKSVTS
ESLKNFFSEKGNVLSAKVSRVPGTSKSSGYGFVSFSSEEDVEAAISSLNNALLDGQKIRV
NKA
NT seq 732 nt   +upstreamnt  +downstreamnt
atgtctaccctttcatctttcaccatatccccaactttcttgcacaaccccagaaataga
aacagaaattcctcaattcaacttccaaacttgtctcttaaaccacaaacagcgcgagta
tgcttatccacgagaatgaatgccgttgaggaagaagaaatttcagtctctacagcggac
ccctcttcggaagccgccaggcgactttacattggtaacattcctcgcacactcaaaccc
gatgagctccgtaaaatcgttgaagagcacgccgccgtcgagaaagccgaggttatgtat
gataagtactccggaaggagtcgtagatttgggtttgttacgatgacaacaattgaggat
gcaagtgctgctgttgaaaagcttaatggcactgaaattggaggtcgtgaaatcaaagta
aacataactgaaaagccattgtcttctgtgggttcgtcacttctccaatcggatgattcc
aaatttgttgacagccctcacaaagtttatgttggtaatctagcaaaaagtgtaacttca
gagtcgctcaagaacttcttttctgagaagggaaatgttttaagtgcaaaggtttcccgg
gttccagggacctcaaagtctagtggatatggttttgtttcattctcttctgaagaggat
gtggaagctgcaatatcatctctaaacaatgcgctgcttgatggacagaagattcgtgta
aataaagcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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