KEGG   Nicotiana tabacum (common tobacco): 107815417
Entry
107815417         CDS       T04643                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
  KO
K07466  replication factor A1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03030  DNA replication
nta03420  Nucleotide excision repair
nta03430  Mismatch repair
nta03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107815417
   03420 Nucleotide excision repair
    107815417
   03430 Mismatch repair
    107815417
   03440 Homologous recombination
    107815417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nta03000]
    107815417
   03032 DNA replication proteins [BR:nta03032]
    107815417
   03400 DNA repair and recombination proteins [BR:nta03400]
    107815417
Transcription factors [BR:nta03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    107815417
DNA replication proteins [BR:nta03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    107815417
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     107815417
   MMR (mismatch excision repair)
     107815417
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     107815417
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N zf-CCHC tRNA_anti-codon zf-CCHC_3 DUF936 zf-CCHC_5
Other DBs
NCBI-GeneID: 107815417
NCBI-ProteinID: XP_016496475
UniProt: A0A1S4C5L7
Position
Un
AA seq 908 aa
MPPINLTEGAIAILTNREAHAEDFKPVLQITDIRLVNTQNQNNNNERYRILLSDGEFLQQ
GMLATQKNDLIRSQQIQKGSIIQMNQFVCNNIQNRMIIIVIELDILLETCDTIGEPKHYL
PNGISPSVPGPAAPLQPSTNQLGGLSGSPQSFTAVSATSSSAPRSNMPGGMRSPESTRSI
GYNTSSAGNIDSERYSSTSAPLYPKAESGPAISRAPMNNYVRPPQPSYQQHPQSSYQQPP
PLYSNRGPIAKNEAPPRIVPIAALNPYQGRWTIKARVTAKAELRHYNNQRGDGKVFSFDL
LDSDGGEIRVTCFNSVADQFYHQIEPGRVYLISKGSLRPAQKSYNHLPNDHEIMLESTSV
VQPCFEDDRTIPQQQFHFRPISDIEALENNSVVDVIGVVSSISPSSSIMRKNGTETQKRV
LQLKDMSGKSVELTLWGNFCNAEGQTLQSMCDSGASPVLAVKAGRVNDFNGKSVGTISTS
KLFTEPDFPEALKLKAWFEREGKNMPSVSLSREVSSIGRTDVRKTISQIKDERLGTSEKP
DWITISATVTFIKGENFCYPACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYI
LQFQIQDHTGLTWVTAFQECGDQIMGVSAKELYFLKYEGQDDDRFTDIMRNVLFNKFIFK
LKVKEEMFSDEQRVKSTVVKAEKLNFQSEIRFLLDLIDKNNGQESSTLPPKTDNATPTSV
YNNAGFGSRTIEPMNPVANYGGSNSSISRESGLQGNQQGQYGNQFTGSQFAPPGSTGMYM
SCNSCGGTGHSASNCPSIMSGQGQAYGGGFGNRVTSGMSSDGASGECYKCHQFGHWARDC
PGVSNAPPANNMTPASGMSSGGASSECYKCHQFGHWARDCPGVSSAPAANNMTPGRYGNP
PRQRVGGF
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgccgccgataaacttgacggaaggcgcgatagcgattctaacgaaccgcgaagcacat
gcggaggattttaaaccggtgttacaaatcacagatattcggttagtgaacactcagaat
cagaataacaataacgaacggtaccggatccttttatcggacggggagtttcttcagcaa
gggatgttagctacgcaaaaaaacgatcttattcggtctcaacagattcaaaaaggatct
attattcagatgaatcagttcgtttgtaataacatccaaaatcgaatgatcatcattgtc
attgaattagatattttactggagacatgtgataccattggagaaccaaagcattatctc
ccaaatggtattagtccttcagtgccagggccagctgccccacttcagccttccaccaat
caattaggtggtttaagtggcagccctcaatcctttactgctgtttcagctacttcaagc
tcagctccaagatcaaatatgcctggtgggatgcgatctcccgagtcaacccgtagcatt
ggttataatacttcctctgctggtaatattgactctgaaagatatagttcaacaagtgca
cccctttaccccaaagcagaatctggtccagcgatttcacgggctccgatgaataattat
gtgcggccacctcagccttcttatcagcagcatcctcagtcttcttatcagcagccacca
ccgttgtactcaaacagaggacctatagccaagaacgaagcaccgccgaggattgttcca
attgctgctctcaatccatatcagggtcgatggactatcaaggccagggttactgctaag
gcagaactcagacactacaacaatcaaaggggtgatggaaaagtattctcttttgatctt
cttgattctgatggaggagaaataagagtaacatgctttaactctgtagctgaccaattt
taccaccagattgagccaggtagagtgtatttgatttccaagggtagcttgagaccagct
cagaaatcttacaatcaccttccaaatgaccatgaaattatgctcgagagcacatcagtg
gttcaaccttgttttgaggatgacaggactattcctcaacaacaatttcattttcggcca
atcagtgatattgaggccttggagaacaatagtgtggtagatgtgattggtgtggtgtct
tcaataagtccatctagctcaataatgaggaaaaatggtacagaaactcagaaaagagtt
ctccagctgaaggacatgtctggcaaaagtgttgaattaactttgtggggaaatttctgc
aatgcagaaggtcaaacacttcaaagtatgtgtgattctggagcttcccctgttttggca
gtcaaagctggtagagtaaatgattttaatggcaaatctgtaggtactatatctacaagc
aagttgtttacagaaccggattttcctgaagctctaaaactgaaggcatggttcgagagg
gagggaaagaacatgccatcagtatctctttcccgagaagtgagcagcattggtcggaca
gatgtgcgaaaaactatatctcaaatcaaagatgaacgattgggcacttccgagaagcca
gattggatcacaataagtgccactgttacatttataaagggtgagaacttttgctatcct
gcctgtcccctcatgataggagatcgacagtgcaacaaaaaagtgacaaataatggggat
gggaaatggcggtgtgacaggtgtgatcagactgttgatgaatgcgaatataggtacatt
cttcagttccagattcaggaccatactggcttaacctgggttactgcatttcaggaatgt
ggtgaccagatcatgggtgtgtctgcaaaagaactgtatttcctaaaatatgaggggcag
gatgatgatagatttacagatatcatgcgtaatgtcttatttaacaaatttatcttcaaa
ttgaaagtgaaagaagagatgtttagcgatgaacagcgcgttaagtcaacagtggtcaaa
gcagagaagctgaacttccaatcagagatccggtttctgttggatttgatagacaagaac
aatgggcaggaatccagtactctgcctcctaagacagataatgcaactccaacttcagtg
tataataatgctggatttgggagtagaaccatagaaccgatgaatcctgttgcaaattat
ggtggcagcaatagcagtatcagcagagaaagtggactgcagggaaatcagcaaggtcaa
tacggaaatcagtttactggctcgcagtttgctccacctggttctacaggcatgtatatg
agctgtaatagttgtggtggaacaggccatagtgcttcaaactgtccaagcatcatgagt
ggtcagggccaggcatatggaggtggctttggcaatagggtaacttcaggaatgagcagt
gatggtgcttctggtgagtgctataaatgccatcagtttggacattgggcaagagattgc
ccaggtgtaagcaatgcaccccctgccaataacatgacacctgcttcaggaatgagcagt
ggtggtgcttccagtgagtgttataaatgccatcagtttggacattgggcaagagattgc
ccaggtgtaagcagtgcacctgctgccaataacatgactcctggaagatatgggaatcct
ccaaggcaacgtgttggtggattttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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