KEGG   Nicotiana tabacum (common tobacco): 107825858
Entry
107825858         CDS       T04643                                 
Name
(RefSeq) THO complex subunit 5B-like
  KO
K13174  THO complex subunit 5
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107825858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107825858
   03041 Spliceosome [BR:nta03041]
    107825858
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107825858
Spliceosome [BR:nta03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107825858
SSDB
Motif
Pfam: FmiP_Thoc5 HPF1
Other DBs
NCBI-GeneID: 107825858
NCBI-ProteinID: XP_016508257
UniProt: A0A1S4D4B9
Position
Un
AA seq 301 aa
MEITMGEPGEILPEHKPEKSPYEVLQQSKASVEEIVSKMLSIKKESAPKSELRELVTQIL
INFVSLRQANRSILLDEDRVKGETERAKAPVDFTTLQLHNLMYEKSHYVKAIKACKDFRS
KYPDIELVPEEEFFRDAPEEIKSSVMSKDNSHNLMLKRLNYELFQRKELCKLREKLEQKK
KALQETIANRKKFLSSLPSHLKSLKKASLPVQHQLGVLHTKKLKQLQYAELLPPPLYVIY
SQLMAQKEAFGENVELEIVGSVKDAQAVARQQANKDTGWSQSIDFLFGLIMCFFLFPETA
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atggagataaccatgggggaacccggcgaaatactaccggagcacaagccggaaaagtct
ccatacgaagttctgcagcaaagcaaagcttcagttgaggaaatcgtttcaaaaatgctg
tccattaaaaaagaaagcgcgccgaaatctgaacttcgcgaactcgtcactcagatttta
atcaatttcgtctctctacgtcaggcaaatagatcaatcttgctcgatgaggatcgcgtg
aaaggtgaaacggaacgtgcaaaagctcccgtcgacttcaccacgctgcagcttcacaac
ttgatgtatgaaaaaagtcattatgtgaaagctataaaggcttgcaaagatttcaggtca
aaatatcctgatattgaactggttcccgaggaagaattctttagagatgcacctgaggag
ataaaaagctctgttatgtcaaaggacaactcacacaatttgatgctaaagcggctcaat
tatgagctattccagcgcaaagaattatgcaagcttcgtgagaaactggaacagaaaaaa
aaggctctacaggagaccattgcaaacagaaagaagttcttgtcaagtctcccgtcacac
ctaaaatcactcaagaaagcatccttgccggtgcagcaccaacttggagttctgcacaca
aaaaagttgaagcagttgcaatatgcagagttgcttcctccgcctctctatgttatttat
tcacagctaatggcccaaaaagaagcctttggagaaaatgtggagctggagattgttggt
agtgtgaaggacgctcaagctgttgcccgccagcaagcaaataaagacactggttggtcc
cagtctatagatttcttatttgggctcatcatgtgtttttttctctttcctgaaactgct
gtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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