KEGG   Nicotiana tomentosiformis: 104095073
Entry
104095073         CDS       T05025                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52B-like
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104095073
   03041 Spliceosome [BR:nto03041]
    104095073
   03036 Chromosome and associated proteins [BR:nto03036]
    104095073
Enzymes [BR:nto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104095073
Messenger RNA biogenesis [BR:nto03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104095073
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104095073
Spliceosome [BR:nto03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104095073
Chromosome and associated proteins [BR:nto03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104095073
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 104095073
NCBI-ProteinID: XP_009599417
Position
Unknown
AA seq 551 aa
MSMPWNGSYTESTRSSRSTRPTYLPPHLRNPSLPPSNVEQLNINAYDDVPVEVTGADIPE
PLSSFSEIGDLYDNIRRCNYVKPTPIQRYAIPVGMAGRDMMACAQTGSGKTAAFCLPIIS
GILKDKRTTSTSTRGRGGCAFPLALILSPTRELSCQIHEEAKKFSYLTGLKVVVVYGGAP
IIPQLGNLEKGVDILVATPGRLVDMIEKSRVSLQAVKYLALDEADRMLDMGFEPQVRKIV
QKMKMPPPGRRQTMLFSATFPTEIQRLASDFLSNYIFLAAGKVGSSTDLIVQKVEFVPDT
DKKDHLLNLLHAQHSNQMDAKLALTLIFVETKRGADTLERWLVRSGIPSIAIHGDKMQFE
RERALKSFKSGQTPVLVATDVAARGLDVPNVAHVINFDLPRNIDDYVHRIGRTGRAGKSG
LATAFFNDKNVPLAKDLVELMQGANQEIPNWLSEYAETCYSSDGARTSRYVGSKFGGYDY
RSVSFHSGSGNYSSQFADTEDATHYAVSASAFTYGAPFAAGCYGPSEMDSFPAASYRYSF
DYAPVTASGWD
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgagtatgccatggaatggttcttataccgagtcaactcgctccagtcgttctactcga
cccacttacctccctcctcacctgcggaacccatcgcttccaccttctaatgttgaacaa
ctgaatataaatgcatatgatgatgttccagtagaggttactggggctgatattccggag
ccactctcgtccttttcggaaattggtgacttgtatgataacataaggaggtgcaactat
gtgaagccaacgccgattcagcgatacgcaataccagtcggaatggcggggagagacatg
atggcttgtgctcagacgggttcagggaaaacggccgcgttttgccttcccattatcagt
gggattttgaaggacaaaagaactactagtactagtacaaggggaagggggggttgcgct
tttcctcttgctctcatactctctcctactagagagttgtcttgtcagatacatgaagag
gcgaagaagttctcttacttgacaggattgaaggttgtggttgtatatggaggagcaccc
ataattcctcagttaggcaatctggaaaagggtgttgacattttagttgccacacctggg
cgcttggtggacatgatagagaaatcaagagtttccttacaagcagtgaaatatttggcc
ttagatgaagctgatcggatgcttgacatgggctttgagccccaagttcgtaagattgtt
cagaaaatgaagatgcccccacctggtagaaggcagacaatgctttttagtgcaacattt
ccaactgagatacagaggcttgcatcggattttctttcaaactacatcttcttggcggct
ggaaaagttgggtccagcactgatctaatagttcaaaaagttgagtttgttcctgatacg
gacaagaaggatcatttactgaatcttcttcatgctcaacattcaaatcaaatggatgca
aagctggctttgactctaatatttgtggagaccaaaagaggagcagatacattagaacgt
tggttggtcaggagtggtatcccgtctattgccattcatggtgataaaatgcagtttgag
agagaacgagcgctaaaatcatttaaaagtggacaaactcctgttttagttgcaactgat
gtagctgctcgcggtctggatgttccaaatgttgctcatgtcataaattttgacttgcca
aggaacatagatgactatgtacacagaattggacgaacaggtcgtgctggtaaatctgga
ttggcaactgcatttttcaatgacaagaatgtacctttggcaaaggatcttgttgaattg
atgcagggggcaaatcaagaaattcctaattggctgagtgaatatgctgaaacatgttac
agcagtgatggtgctagaacgagtcgctatgttggaagtaagttcgggggctatgattac
aggagtgtttccttccatagtggtagtggaaactactctagccagtttgctgatacagaa
gatgctactcattatgctgtgtccgctagcgctttcacctacggtgctccttttgcagcg
ggttgttatggtccttctgaaatggactcctttcctgctgcttcataccgttacagtttt
gattatgcacctgttactgctagtggctgggattga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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