KEGG   Nicotiana tomentosiformis: 104101517
Entry
104101517         CDS       T05025                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nto04131]
    104101517
   04121 Ubiquitin system [BR:nto04121]
    104101517
Enzymes [BR:nto01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104101517
Membrane trafficking [BR:nto04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104101517
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104101517
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-rbx1 Anti-TRAP zf-C3HC4_3 zf-ANAPC11 DUF2116 zf-RING_5 zf-Nse
Other DBs
NCBI-GeneID: 104101517
NCBI-ProteinID: XP_018628058
Position
Unknown
AA seq 340 aa
MSSRENPNNGIRNFQRYWCYQCHRTVRISPENPSEIVCPRCFGHFLCDIEETNARQILDF
TAFDPSPEARILEALTLMLDPNLFNRSSSGNAVPIFRRSDGTETIVPPDSIRPTREQRRT
RDSWLRPRRRYSFLSNDTDEWTPESGILARPRSWIILRPAGEYFPGGPNRLQERERRLGP
PSGVNDRDYFTGPGLENLIEELTENDRPGPAPAPEPIIDSIPTVVITPEHLRDDSECPVC
KERFKIGGEARELPCKHIYHSDCIVPWLRLHNSCPVCRNPLPASSETQMDTSDDCLEEGI
NRQRRCFRLRQIAASLWPFRSRYRPLRNHDEPSRPSCHIL
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgtcctcaagagaaaaccctaataatgggatcaggaacttccagcgttactggtgttat
caatgccatcgcactgtcagaatatcgcccgaaaacccttcggagatagtttgtcctcga
tgtttcggccacttcctttgcgacatcgaagagacaaacgctagacaaatcttggacttc
actgcatttgatccttccccagaagctagaattcttgaagctctaactctcatgcttgat
cctaatttgttcaacagatctagcagtggcaatgcagtccccatttttcgacgatcggac
gggacagaaaccatagtaccacctgattctatcaggcctacacgtgaacaacgcagaaca
cgagactcttggctaaggccaagaagacgatactcatttctaagtaatgacacggatgaa
tggacaccggagagtggaattctagcacgtccacgttcatggattattcttcggccagcc
ggagaatatttccccggtggacctaaccgactacaagaaagagaaaggcggttaggtcca
ccttcaggagtaaacgatagagattactttacaggtccaggccttgaaaacctaatagaa
gaattaactgaaaatgatcggccaggtccagcaccggcaccggagccaatcatcgattct
attccgacggtagtgattacgccagaacacttaagggatgattcagaatgtcctgtttgt
aaggaaaggttcaaaataggcggagaagcaagagagttgccgtgcaaacatatataccat
tccgattgtattgtgccttggttaaggcttcataattcttgccctgtttgtcgaaatccg
ttgcccgcttcttctgaaactcaaatggatacctcggatgattgtcttgaagaagggatc
aatagacagcggcgttgcttcagacttagacaaattgcagcttctctttggccatttcgt
tcgaggtatcgccctttgcgtaaccatgatgaaccgtcgaggccttcatgtcatattctt
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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