KEGG   Nicotiana tomentosiformis: 104105865
Entry
104105865         CDS       T05025                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nto04131]
    104105865
   04121 Ubiquitin system [BR:nto04121]
    104105865
Enzymes [BR:nto01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104105865
Membrane trafficking [BR:nto04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104105865
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104105865
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-ANAPC11 Zn-ribbon_8 Rad50_zn_hook Prok-RING_1
Other DBs
NCBI-GeneID: 104105865
NCBI-ProteinID: XP_009612572
Position
Unknown
AA seq 302 aa
MSTTTTATPPQHHHTFWCHECDMSVFLLHLPSTDPPRCPHCHSDFLEQMDSFTPTLLPQF
PNQPDSNPNLEDLISTDLNTATNFTPSDDNFLLDSPYLHRLIHHLTTANDAPIPNRQHSP
ASKAAMEALEGIKISSLMLENDPVIPCPVCKDNFLLDMEVKMLPCKHMYHSDCILPWLEV
NNSCPVCRFKLPTEEEDDEECIRRRERFLGAMRLGEILAEEEDLFGFRRTLRRVARRHQL
DGGESTIGQAGQGVGVVARANSVETVSSWPSWPVENGSDGDEVGGSDNRLGGGQGDTTVV
RS
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtccaccactacaaccgcaactccaccacagcaccaccacactttctggtgtcacgag
tgcgacatgagcgtcttcctcctccacctaccctctactgatcctcctcgttgtcctcac
tgccattccgatttcctcgagcaaatggactcttttacccctacccttcttcctcaattc
ccaaatcaacctgattctaaccctaaccttgaagacctcatatccacggacctcaacacc
gcgaccaatttcactccctccgacgataacttcctccttgacagtccttatctccaccgt
ctaatccaccatctcaccaccgctaacgacgctcccattcccaatcgtcagcacagcccg
gcttctaaagctgccatggaggcacttgagggaataaaaattagctcattgatgcttgag
aatgatccggttattccttgtccggtctgcaaggacaactttttactggacatggaagtg
aaaatgttgccttgcaaacacatgtatcattcggattgtattttgccgtggttagaagtg
aataattcgtgtccagtttgtaggtttaagttgccgactgaggaggaggatgatgaggaa
tgcattagacgacgcgagaggtttcttggggcaatgaggcttggagagatattggccgag
gaagaggatttgtttgggtttaggcgtacgcttaggcgtgttgccaggaggcatcagctg
gacgggggagagagtacaattggccaggcaggtcaaggagttggggttgtggctagggcg
aatagcgtggagactgtgtcgagttggccgagttggccagtggaaaatgggagtgatggt
gatgaagtaggtgggagtgataatagacttggtggtggtcaaggggatactactgtcgtc
aggtcttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (27)   

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