KEGG   Nicotiana tomentosiformis: 104108828
Entry
104108828         CDS       T05025                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03030  DNA replication
nto03410  Base excision repair
nto03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104108828
   03410 Base excision repair
    104108828
   03420 Nucleotide excision repair
    104108828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nto03032]
    104108828
   03400 DNA repair and recombination proteins [BR:nto03400]
    104108828
Enzymes [BR:nto01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104108828
DNA replication proteins [BR:nto03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    104108828
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      104108828
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE DNA_pol_D_N Peptidase_M16
Other DBs
NCBI-GeneID: 104108828
NCBI-ProteinID: XP_009616251
Position
Unknown
AA seq 529 aa
MSGVVRNKVQRKFKMRGYSLKVDALSEVLSFLSHFPSDALDDALELLLDELHHLSLKSAI
LDREPVHKVASLLLEAEAAVEENPSSSSSSASALRITDAFIVPKFRYDPVKKFFHEHTGR
LPIHGDASAKATLYKDRFLLLFQRLSRDPRFSTLAFDAPTSEYGSCEISPIQSLVGRVGR
RWIMGVISQLEDDHFYLEDLTAAVEVNLSSAKITTGFFAENTIVLAEGEMQLDGVFQVRT
CGFPPLEDREKSMAFFSGLDFFGGGILTKEETLRLAELEKKAVNDMFVILSDIWLDNEET
LGNLETILNGYENVEVVPSLFVLMGNFCSQPFNLSFKSISSLRVQFGKLGQMIASHQRLK
EHSRFLFIPGPDDVGPSTVLPRCPLPKYLTEELQKYVPNAIFSSNPCRIKFYTQEIVLFR
QDLLYRMRRSCLIPPSTEETSDPFEHLVATIIHQSHLCPLPLTGQPIIWNYDHSLHLYPT
PHTIVLGDKSEQKAFRYTGVTCFNPGSFSNDGTFVAYRPCNQEVELSAL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgagcggagttgtaaggaacaaagtacagaggaagttcaagatgaggggttactctctc
aaagttgacgctctttccgaagtcctctctttcctttcccattttccttccgatgccctc
gacgacgctcttgaactccttctcgatgagctgcaccatctctctttgaaatcagcgatt
ctggacagagagccggttcataaagtggcgagtcttttattggaggcagaagccgccgtt
gaggagaaccctagctccagttcatcatctgcttctgcccttcgtattactgatgctttt
attgttcctaaattccgatacgatcctgttaagaagttctttcacgagcacacagggcgg
cttcccattcacggtgatgcctctgcaaaagccaccttatataaggatagattcctctta
ttattccagaggttatctcgtgatccacggttttcaacccttgcttttgatgcccctact
tcagagtatggcagctgtgagatatctcccattcaatctcttgttgggcgggtagggaga
agatggataatgggtgtaatatctcagttggaggatgatcatttctacttggaagacctt
actgcagctgttgaagttaatttatctagtgcaaagataactacaggtttctttgcggaa
aatacaatcgtcctggcagaaggtgaaatgcagttggatggtgtctttcaggtcaggaca
tgtggatttcctccattagaggacagagaaaagtccatggcatttttttcaggactagac
ttctttggtggtggtattcttaccaaagaggaaactcttagacttgcagagctggagaaa
aaagctgtgaatgacatgtttgttatactatctgatatctggctggacaatgaggagact
ttgggaaatctggagactatcctcaatggttatgaaaatgtagaggtggttccttcttta
tttgtcctcatggggaatttctgctctcagccatttaatctttccttcaagtcaatctca
agtctcagggttcagtttggaaagcttgggcaaatgattgcctcgcaccaacgactaaaa
gagcatagtcgatttctgtttatccctggtcctgatgatgtaggtccttcaacagtctta
cccagatgtcctttgcccaaatacctaactgaagaacttcagaaatatgttcccaatgca
atattctccagtaacccatgcagaatcaagttttatacccaagaaattgtactattccgc
caagatttgctttatagaatgcgaaggtcatgtttgatacctccctcaacagaagaaacc
agtgatccatttgagcatcttgttgcgacgataatacatcagagccatctctgccccctt
cctttgacaggtcaacccattatctggaattatgatcacagtctacacctttatccaacc
ccgcatacgatagtgttgggggacaaaagtgagcagaaggctttcaggtacacaggagtt
acatgctttaatcctggttccttctcaaatgatggcacatttgtggcatatcggccgtgc
aatcaggaagtagaactatctgcattgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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