KEGG   Candidatus Nitrosoglobus terrae: TAO_1642
Entry
TAO_1642          CDS       T05173                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
ntt  Candidatus Nitrosoglobus terrae
Brite
KEGG Orthology (KO) [BR:ntt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ntt03032]
    TAO_1642
   03400 DNA repair and recombination proteins [BR:ntt03400]
    TAO_1642
Enzymes [BR:ntt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     TAO_1642
DNA replication proteins [BR:ntt03032]
 Prokaryotic type
  DNA Topoisomerases
   TAO_1642
DNA repair and recombination proteins [BR:ntt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TAO_1642
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim
Other DBs
NCBI-ProteinID: BAW81012
UniProt: A0A1Q2SPF6
Position
complement(1785896..1788298)
AA seq 800 aa
MSKSLVIVESPAKAKTIKKYLGKDFEVLASYGHVRDLIPKEGAVDPKHGFAMKYQVIEKN
NRHVNAIAKALKKANFLFLATDPDREGEAISWHLLELLKEQGALEDKPVKRVVFHEITRQ
AVSEAIAHPRDISVDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
EREKEIEEFKKREYWTLEADSEADQVAFVAKLTHLEGKKLEQFSIENKDQAQSLVEQLTR
AAENKLHVLKVERKQRRRNPASPFITSTLQQEASRKLGYTTKRTMTIAQQLYEGIEIGTE
SVGLITYMRTDSVNLAHEAMDELRNFIVERFGKTNLPAEPRVFKTRAKNAQEAHEAVRPT
SVYRIPEGLESYLKPEQFKLYQLIWNRTVACQMIHATINTVAVDLDVQRPVIKGVISKGS
GNLFRATGATIVDPGFMAVYQEGQDEVKEEEQRTLPLMKEGDIVKLLQIRPEQHFTEPPP
RYTEASLVRILEEFGIGRPSTYAAIISTLQQRNYAVLENKRFQPTDVGRVVNRFLTEHFN
PYVDYDFTARLEDNLDAISRAEKDWIPILEEFWEPFFMRVQEKEQSVSREEAIQVRELGI
DSKSGRPISVRMGRYGPYVQIGSKDDEEKPRFAGLRLGQKMDTITSEEAIALFELPRDLG
VTAEGKLISVNIGRFGPYVKYDNKYLSIRGEDPYTITLARALDLIEEKNQADASRVIKVF
PESNIQILNGRYGPYITDGERNVRVPKDQAPKDLSLEQVQTLISEAPIRKQSRRKAETLG
DKVLVKKQAHRVSTQKKAKG
NT seq 2403 nt   +upstreamnt  +downstreamnt
ttgagtaaaagtctggttatcgtagaatcacctgctaaggctaagacgattaaaaaatac
ttagggaaggattttgaagttttagcctcttatgggcacgtacgagatttaattcctaaa
gaaggcgcagtagatcctaagcatggatttgctatgaaatatcaagtcattgaaaaaaat
aaccgccatgtgaatgctattgctaaagctttgaaaaaagctaatttcctttttttagcc
actgatccagatcgagagggggaggcgatttcttggcatctcttagagcttcttaaagaa
caaggagcgctagaggataaaccggttaaacgggtagtgtttcatgaaattacccgtcag
gcagtcagcgaagcgattgctcacccccgggatatttctgtagatttagtcaatgcccag
caagctcgccgtgctttggattatttagtcgggtttaatctctctccattactatggaag
aagattcgccgtggcttgtccgcagggcgagtgcagagtcctgcattgcgtttaatttgc
gagcgagaaaaagaaattgaagaatttaagaaacgggaatattggactcttgaggctgat
tctgaagcagatcaagtagcatttgtagctaaattgactcacctagagggcaaaaaatta
gagcagttttctatcgaaaataaagatcaggctcaatctttggtagaacaactcactagg
gcagcggaaaataaactgcatgtactgaaagtagagcgtaaacaacgacggcgcaacccc
gcatccccctttattacttctactttacagcaggaagcttctcgtaagcttggttacacg
acaaaacggacgatgactatagcccaacagctgtatgaagggatcgagatcggaactgaa
tctgtaggcttgattacttatatgagaactgattcagttaatttagcccatgaagcaatg
gatgagcttcgtaattttattgttgagcgttttggtaaaactaatttgccagctgaacct
agggtatttaagacccgagctaagaatgctcaggaggctcatgaagctgttcgcccgacc
tcagtatatcgaatacctgagggtttggagtcttacttaaaacctgagcaatttaagctt
tatcagcttatctggaatcgcactgttgcttgccagatgattcatgccactattaatacc
gttgctgtagatttagacgtacaaagacctgtgataaagggagttattagtaagggtagt
ggtaatctttttcgagcgacgggagccactattgtagatcccggttttatggccgtgtac
caggaaggacaagatgaggttaaagaggaggagcagcggacactgccgttaatgaaagaa
ggagatatcgtaaaattactacagatacggccggagcagcatttcactgaaccacccccc
cgttatactgaggctagcttggtacgtatcttggaggagtttgggattgggcgaccttct
acctacgctgcgattatctccactcttcagcagcgcaattatgccgtgttagaaaataaa
cggtttcagccaaccgatgtagggcgtgtagttaatcggtttttaacagaacattttaac
ccttatgtggattatgattttaccgcccgtttagaggataatcttgacgctatttctcgg
gcagaaaaagactggattcccatattagaggagttttgggagcctttttttatgcgagta
caagaaaaagaacaaagtgttagccgagaagaagccatccaagttcgagaattaggtatc
gattctaaaagtggtcgccctatatcggtgcgtatggggcgctatggaccttatgtccaa
ataggatctaaagatgatgaagaaaaaccccgctttgctggcttacgactagggcagaaa
atggataccattacttcagaggaagccatagcgttgtttgagttaccgcgggatttgggg
gttacggccgaaggtaaattgattagtgttaatattggccgtttcggcccctatgttaaa
tacgataataaatatctctctataaggggagaggatccctacaccataaccttagcgcgt
gcccttgatctcattgaagagaaaaatcaggcggatgctagccgagttatcaaggttttt
ccagaaagtaatatccagattctcaacggccgttatggaccctatatcactgatggtgag
cgtaatgttcgggttcctaaagatcaagcgcctaaagatctgagcctagaacaggtgcaa
acgctaataagtgaagcaccaataagaaaacaaagtcgtcgtaaagccgaaactctaggc
gacaaagtactcgtaaaaaaacaggcgcatcgagtgagtacacaaaagaaggctaaagga
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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