KEGG T01037: NEMVE

Nematostella vectensis (sea anemone): NEMVE_v1g244165

Entry

NEMVE_v1g244165 CDS T01037

Definition

hypothetical protein

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

nve Nematostella vectensis (sea anemone)

Pathway

nve03022	Basal transcription factors
nve03420	Nucleotide excision repair

Module

nve_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:nve03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:nve03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3 SinI

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 471 aa
MAAVDSDKWGCSFFRHLQRKDLYEYLSGLPVGILDRLFCHPATCLTVFRELPELAKHFVM
RTLFADQPVPESIVSTWVKSAYYKYNIGSLNTLKQLRIWREVPSGVHKRYEMNATFRTNM
KAALCGGGKSWMGSTQHLGPDKHTREPDFLDKYAIERWESVLHFMTGSTEMADNAGGVSQ
DVVKVLVLSGLMKCESPGSNPIISPAGFQFLLLDRPSQVWYFMLQCLETVEARGMDLVEC
LSLLFQLSFSSPGKDYPTDGLTDSQMKFLQQLREIGLVFQRKRKSRRYYPTKLSVNLTAA
GKGINTTDSQIEAGFIIIETNYRVYAYTESCLQVSLIGLFCEILCRFPNLCVASLTRESC
QQALASGISAEQILNFLQTRAHPEMLKRTPIIPSTISDQVRLWEMERSRMKFTEGVLYNQ
FLSQADFEMLRKYAEDLGVLIWANSTKRVVVVSRSGHDDVKRFWKRQRQGP

NT seq 1416 nt +upstreamnt +downstreamnt
atggcggccgtggatagtgataaatggggttgctccttctttcgccatttgcagcgaaag
gatctttatgagtatttatctgggcttccagttgggattctagacagattattttgtcac
ccagcaacttgccttaccgtattcagagagcttcctgaacttgcaaaacactttgtgatg
agaacgttgtttgctgatcagccggtacctgaaagcatagttagtacatgggtgaagagt
gcatattacaagtataacataggttccctgaatacgctgaagcagttgagaatctggcgt
gaggtacctagtggagtgcataagcgatatgagatgaacgcaaccttcaggacaaatatg
aaggctgcattatgtggagggggaaagtcatggatgggctcaacccagcaccttggtcca
gataaacacacaagagagccagatttcttggataaatatgctatcgagagatgggagagt
gttcttcatttcatgacgggctccacagagatggcagacaatgcaggaggtgtcagccaa
gatgttgtgaaagttcttgttttgagtggactcatgaaatgtgagtcccctggctcaaat
cctattatcagtcctgctggcttccagttccttctcttggacagaccctcacaagtctgg
tacttcatgcttcaatgtctagaaacagtggaggccagaggcatggaccttgtagagtgt
ctgtctttgctttttcagctcagcttctcatctcctggaaaggactatcctactgatggg
ctcactgatagccagatgaagtttcttcaacaattaagagaaataggcttagtattccaa
agaaagagaaagtcaaggagatattatcccacaaaattatctgttaatttaacagcagca
gggaaaggaattaatactacagattcacaaatagaagctgggtttattattattgagaca
aactacagagtatatgcatacacagagtcttgccttcaagtgtccctcatcggattgttc
tgtgagatactctgtagattcccaaacttatgtgtggcaagtttaacacgagaaagctgt
cagcaggctctagcaagtggaatttctgcagaacagattctgaattttctgcaaacgcga
gctcaccccgagatgttaaaaagaaccccaattataccatcgaccatcagtgatcaagtc
cgcctgtgggaaatggaacgcagcagaatgaagttcaccgaaggtgtgttatacaaccag
tttctttcacaagcggactttgaaatgctccgcaaatatgccgaggacctcggcgtactc
atctgggcgaactcgaccaaaagagtcgtggtcgtcagtcgctcaggacacgacgacgtc
aagcgattctggaagagacagcggcaaggcccatga

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-NVE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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