KEGG   Nematostella vectensis (sea anemone): NEMVE_v1g244165Help
Entry
NEMVE_v1g244165   CDS       T01037                                 

Definition
hypothetical protein
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
nve  Nematostella vectensis (sea anemone)
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:nve00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    NEMVE_v1g244165
  Replication and repair
   03420 Nucleotide excision repair
    NEMVE_v1g244165
Transcription machinery [BR:nve03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     NEMVE_v1g244165
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
AA seq 471 aa AA seqDB search
MAAVDSDKWGCSFFRHLQRKDLYEYLSGLPVGILDRLFCHPATCLTVFRELPELAKHFVM
RTLFADQPVPESIVSTWVKSAYYKYNIGSLNTLKQLRIWREVPSGVHKRYEMNATFRTNM
KAALCGGGKSWMGSTQHLGPDKHTREPDFLDKYAIERWESVLHFMTGSTEMADNAGGVSQ
DVVKVLVLSGLMKCESPGSNPIISPAGFQFLLLDRPSQVWYFMLQCLETVEARGMDLVEC
LSLLFQLSFSSPGKDYPTDGLTDSQMKFLQQLREIGLVFQRKRKSRRYYPTKLSVNLTAA
GKGINTTDSQIEAGFIIIETNYRVYAYTESCLQVSLIGLFCEILCRFPNLCVASLTRESC
QQALASGISAEQILNFLQTRAHPEMLKRTPIIPSTISDQVRLWEMERSRMKFTEGVLYNQ
FLSQADFEMLRKYAEDLGVLIWANSTKRVVVVSRSGHDDVKRFWKRQRQGP
NT seq 1416 nt NT seq  +upstreamnt  +downstreamnt
atggcggccgtggatagtgataaatggggttgctccttctttcgccatttgcagcgaaag
gatctttatgagtatttatctgggcttccagttgggattctagacagattattttgtcac
ccagcaacttgccttaccgtattcagagagcttcctgaacttgcaaaacactttgtgatg
agaacgttgtttgctgatcagccggtacctgaaagcatagttagtacatgggtgaagagt
gcatattacaagtataacataggttccctgaatacgctgaagcagttgagaatctggcgt
gaggtacctagtggagtgcataagcgatatgagatgaacgcaaccttcaggacaaatatg
aaggctgcattatgtggagggggaaagtcatggatgggctcaacccagcaccttggtcca
gataaacacacaagagagccagatttcttggataaatatgctatcgagagatgggagagt
gttcttcatttcatgacgggctccacagagatggcagacaatgcaggaggtgtcagccaa
gatgttgtgaaagttcttgttttgagtggactcatgaaatgtgagtcccctggctcaaat
cctattatcagtcctgctggcttccagttccttctcttggacagaccctcacaagtctgg
tacttcatgcttcaatgtctagaaacagtggaggccagaggcatggaccttgtagagtgt
ctgtctttgctttttcagctcagcttctcatctcctggaaaggactatcctactgatggg
ctcactgatagccagatgaagtttcttcaacaattaagagaaataggcttagtattccaa
agaaagagaaagtcaaggagatattatcccacaaaattatctgttaatttaacagcagca
gggaaaggaattaatactacagattcacaaatagaagctgggtttattattattgagaca
aactacagagtatatgcatacacagagtcttgccttcaagtgtccctcatcggattgttc
tgtgagatactctgtagattcccaaacttatgtgtggcaagtttaacacgagaaagctgt
cagcaggctctagcaagtggaatttctgcagaacagattctgaattttctgcaaacgcga
gctcaccccgagatgttaaaaagaaccccaattataccatcgaccatcagtgatcaagtc
cgcctgtgggaaatggaacgcagcagaatgaagttcaccgaaggtgtgttatacaaccag
tttctttcacaagcggactttgaaatgctccgcaaatatgccgaggacctcggcgtactc
atctgggcgaactcgaccaaaagagtcgtggtcgtcagtcgctcaggacacgacgacgtc
aagcgattctggaagagacagcggcaaggcccatga

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