KEGG   Nicrophorus vespilloides (burying beetle): 108558992
Entry
108558992         CDS       T04922                                 
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
nvl  Nicrophorus vespilloides (burying beetle)
Pathway
nvl03022  Basal transcription factors
nvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108558992
  09124 Replication and repair
   03420 Nucleotide excision repair
    108558992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nvl03021]
    108558992
   03400 DNA repair and recombination proteins [BR:nvl03400]
    108558992
Transcription machinery [BR:nvl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     108558992
DNA repair and recombination proteins [BR:nvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     108558992
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 108558992
NCBI-ProteinID: XP_017771590
Position
Unknown
AA seq 300 aa
MMMDLEGSTEKSADFTNTDETSLLVIIMDSNPAQRILRENPHVLTQCVDSVIAFANAHLM
QKAQNKLAVMACHSKLSEFIYPGPGKQLDVRQIDGQYEVFTLVEKTIKQNLAKILTSETS
TVITESLLAGAIAMALCYIHRINRIKAPGLKLNSRILVVTGSGDSASQYMNYMNVFFTAQ
KQNVVIDVCALDQHLSLLQQGCDITSGMYLRVPQMQGLLQYLLWVFLPEPPIRQKLVLPP
PVKVDYRAACFCHRELIDIGYVCSVCLSIFCKFSPICTTCHTVFKIPSLGVKPKKKKLKI
NT seq 903 nt   +upstreamnt  +downstreamnt
atgatgatggacctggagggaagcacggagaaatccgcggatttcacgaacacggacgag
acgagtctcctggtgatcataatggactcgaacccggcgcagcggatcctccgcgagaat
ccgcacgttctcactcagtgcgtggactcggtgatcgcattcgccaatgcccacctgatg
cagaaggcgcaaaacaaattggcggtcatggcatgccattcgaaattgagcgaattcatc
tatcctggtcccgggaagcaattggatgtgaggcaaatcgatggacagtatgaggtattc
acattggtggagaagacaatcaaacagaatctggccaagatactgacctcggagacgtcg
acagtgatcacagaatcacttctcgctggggccatcgcaatggccctctgttacatacac
cgtatcaataggattaaagcgccaggattgaagctaaatagcagaatcctggttgtgaca
gggagcggcgattcggcatcgcaatacatgaattacatgaacgtgttcttcacggcgcag
aaacaaaatgtggtcatcgacgtgtgcgctctggatcagcacctgagtctgctgcagcag
ggctgcgacatcaccagcggcatgtacctgagggtgccgcagatgcaaggattgttgcag
tatctgctgtgggtcttcctgccggagccaccgatcaggcagaaacttgtcttacctcca
cccgttaaggttgattatagggcggcatgtttctgtcatcgcgaactcatcgatattggc
tacgtctgctcagtttgtttatcaattttctgcaagttcagtcccatttgcaccacctgc
cacactgtattcaaaatcccgtcgctgggcgtcaagccgaagaagaaaaagctgaagatc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (40)   

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