KEGG   Nicrophorus vespilloides (burying beetle): 108562452
Entry
108562452         CDS       T04922                                 
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
nvl  Nicrophorus vespilloides (burying beetle)
Pathway
nvl03013  Nucleocytoplasmic transport
nvl03015  mRNA surveillance pathway
nvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108562452
  09122 Translation
   03013 Nucleocytoplasmic transport
    108562452
   03015 mRNA surveillance pathway
    108562452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvl03019]
    108562452
   03041 Spliceosome [BR:nvl03041]
    108562452
   03009 Ribosome biogenesis [BR:nvl03009]
    108562452
   03012 Translation factors [BR:nvl03012]
    108562452
Enzymes [BR:nvl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     108562452
Messenger RNA biogenesis [BR:nvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108562452
   mRNA cycle factors
    Stress granule specific factors
     108562452
Spliceosome [BR:nvl03041]
 Complex C
  Other components
   EJC/TREX
    108562452
Ribosome biogenesis [BR:nvl03009]
 Eukaryotic type
  90S particles
   Helicases
    108562452
Translation factors [BR:nvl03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    108562452
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 UTP25 AAA_30 TniB UvrD-helicase
Other DBs
NCBI-GeneID: 108562452
NCBI-ProteinID: XP_017776290
Position
Unknown
AA seq 405 aa
MGDAGKSGNTNTLLEDLSNVEFETSEDVEVIDKFKNMNLREELMRGIFAYGFEKPSAIQQ
RAIRPIMKGRDVIAQAQSGTGKTATFSISILQSLDLTMRETQVLCLSPTRELAVQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRALRTRSVKMLVL
DEADEMLNKGFKEQIYDVYRFLPPSTQVVLISATLPHEILEITSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSS
MHGDMPQKERDVIMKEFRSGQNRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgggtgatgctggtaaaagtggaaataccaacactttgttggaagatctatctaacgtg
gagttcgaaacgagcgaagatgtggaggttattgataaattcaagaatatgaacctcaga
gaagagctgatgaggggaatctttgcatatggtttcgagaagccatcagctatacagcag
cgagcgatcagacctataatgaagggtcgggatgtgattgctcaagctcaatctggtaca
ggcaaaacagccaccttctcaatttctatattgcaatctttggatttgactatgcgtgag
acccaggttctgtgtctttcacctacaagggaactcgctgtacaaattcaaaaggttatt
ttggctttgggcgatttcatgaatgtgcaatgccatgcttgcatcggtggcactaatctg
ggtgaagatatcaggaaacttgattatggacagcatgttgttagtgggacaccaggaaga
gtttatgatatgattcgtagacgagctcttagaaccagatctgtaaaaatgttggttctt
gatgaagcagatgagatgttgaacaaaggattcaaggagcagatttatgatgtatatagg
tttttgcctccgtctactcaggttgttttaatctctgctacattgcctcacgaaatctta
gaaatcacctccaagttcatgacggatccgattcgcattttagtcaaacgtgatgaattg
actctcgaaggaatcaaacaattctttgtggctgttgaaagagaagaatggaaatttgac
acactctgcgatttgtatgacacattgacgattacacaagccgtaatattctgcaacact
aagcgtaaggtcgattggttaactgagaagatgagggaagctaactttacggtcagctcg
atgcatggagacatgccgcagaaagagcgcgatgtcattatgaaagaattcagatctgga
cagaacagagtattgatcaccacggatgtatgggcaagaggaatcgatgtgcagcaagtc
agtttggtcatcaattacgatttgccaaataatcgtgaattgtacattcaccgcatcggt
agatccggacggttcggcaggaagggtgttgcaattaactttgtcaagagtgacgacatc
aggatcctcagggatattgaacagtactactccacacaaatcgatgagatgcctatgaat
gtcgctgatttaatttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (257)   
   KEGG ORTHOLOGY (1)   
   RefGene (253)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (280)   

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