KEGG   Nitrososphaera viennensis: NVIE_012290
Entry
NVIE_012290       CDS       T03200                                 
Symbol
tfb3
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nvn  Nitrososphaera viennensis
Pathway
nvn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NVIE_012290 (tfb3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nvn03021]
    NVIE_012290 (tfb3)
Transcription machinery [BR:nvn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NVIE_012290 (tfb3)
 Prokaryotic type
  Archaeal type
    TFB
     NVIE_012290 (tfb3)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Sigma70_r4 HTH_AsnC-type Trm112p LacI HTH_11 HTH_Tnp_ISL3 HTH_23 HARE-HTH GerE Sigma70_r4_2 HTH_Crp_2 RB_B
Other DBs
NCBI-ProteinID: AIC15462
UniProt: A0A060HQM4
Position
1039505..1040410
AA seq 301 aa
MKTSLVSPCKHEKTVTDPESGEIICRSCGLVISDKIQEMRPEWRAFTSQEADDRARTGIP
SSLARHDMGLSTVIARTDKDASGRLIEGVMKSTMDRLRAWDFRTQAHSPTDRNLRQAFSE
LDRLKDKLSLSDAVVEKTAYIYRKAQERGLVRGRTISATLGAALYIAIRETGMSRTLKDI
AETSNVKRKDLARMYRLVVLELDLKIPMIDPMKCIARVASKSGLSEKTKRHAMNIMYDVV
KSGMSAGKDPMGLAASVLYMASLETGENRTQTDIAEAAGVTEVTVRNRYKNLKSRLDSLA
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaacatcgctagtatccccatgcaaacacgaaaagacggtcacagacccagagtct
ggcgagattatttgccggagctgcgggctcgtgatatcggacaagatacaagagatgcgg
cccgaatggcgcgcgtttacctctcaagaggcagacgacagggctaggactggaatcccc
agttccctcgcacgccatgacatgggcctgtctacagtgattgcaaggacggacaaggac
gcaagcgggcgcctgatagagggtgtcatgaagtcaactatggacaggctgagggcgtgg
gatttccgcacgcaggcccactcgccgactgataggaacctcaggcaggcgttctcggag
ctggacaggctaaaagacaagctgtcgctgtccgacgccgtggtggaaaagacggcttac
atatacagaaaagcgcaagagcgcggtctcgtaaggggcaggaccatatccgcgaccctt
ggagcggcgctgtacattgcgatacgcgagacaggcatgtcaaggacgctaaaagacatc
gccgagaccagcaacgtcaagcgcaaggacctggcaaggatgtacaggctcgtagtgctt
gaactggacctgaaaatcccgatgatagacccgatgaagtgcatcgcaagggtcgcaagc
aagtcgggattgagcgaaaagaccaagcggcatgctatgaacatcatgtatgatgtcgta
aagagcggcatgtccgccggcaaggaccctatgggacttgcggcatcagtgctgtacatg
gcgtcgcttgagacaggcgagaacaggacccagacggacatcgccgaggccgcaggggtc
accgaagtgaccgtcagaaataggtacaagaatctaaagagccggcttgattcgctggcg
aattag

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