KEGG T01266: Nwat

Nitrosococcus watsonii: Nwat_2040

Entry

Nwat_2040 CDS T01266

Definition

helicase, RecD/TraA family (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

nwa Nitrosococcus watsonii

Pathway

nwa03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:nwa03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 HHH_5 HHH_2 AAA_11 Helicase_RecD AAA_22 PIF1 NTPase_1 DUF258 AAA_16 AAA_29 T2SE AAA_25 AAA_28 AAA ATP-synt_ab AAA_14 ABC_tran DUF2075 PhoH cobW AAA_17 AAA_5 AAA_18 TrwB_AAD_bind UvrD_C UvrD-helicase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2227575..2229758

AA seq 727 aa
MNTFHPESLPEYLTGTIERVTFHSEESGFCVLRVKVRGERDLITVVGNTATAIPGEYVEC
RGEWLNDRTHGLQFKAKHLKVIPPSTLEGIEKYLGSGMVKGIGPHFAKKLVQTFGEQVFE
IIEHKAERLTELDGIGPKRKARVIQSWAEQKAVRAIMVFLQSQGVGSARAVRIYKTYGDH
AIEQVRENPYRLALDIHGIGFKTADRIAQRLGIPADSLIRAQAGVRHVLQEFATEGHCAM
EREKLADTASQLLEISVPIIEHAIAQEVTEGQFIDEIIHDKPCLFLASLYRAETGIAKHL
QRLLQSLPPWGEINTDKAIPWVEEKTGLRFSPSQRAAVIQAVRGKITVISGGPGVGKTTV
VNSILRIIRAKQIQVHLGAPTGRAAKRLAESTGLEAKTIHRLLEFDPHAMGFKHHGGNPL
HTDFIVIDEVSMVDVKLMNQLLQAIPTHAACLLIGDRDQLPSVGPGQVLADIIASKKITT
AHLTEVFRQAANSKIVVNAHRINQGKMPERTHEAAPLSDFYFIPTESPEAIQDRLLELVT
TRIPKRFGFDPICDIQVLTPMNRGSLGTQALNALLQQQFNPQAGPKINRFGWTFAPGDKI
VQTVNNYDKEVFNGDIGRITRIDPEKSLVYISIDDREVEYELGELDEIALAYAISVHKSQ
GSEYPAVVIPLATQHYTMLQKNLLYTGVTRGKKLVVIVGQPKALAIAVKKSHATSRLTHL
SARLANS

NT seq 2184 nt +upstreamnt +downstreamnt
atgaacactttccacccagaatctctgcctgaatatctcactggcaccatagaacgggtt
acttttcatagcgaggaaagtggattttgcgtcctgcgagtcaaggtgcgtggcgagcgc
gatctcatcaccgtggttggtaataccgcgacagccataccgggggaatatgtggaatgt
cgcggcgaatggctcaatgaccgcacccatggacttcagttcaaagcaaaacatctgaaa
gtcatcccccccagcactctcgaaggaattgaaaagtatctcggctcgggcatggtcaaa
gggatcggtccccactttgccaagaaattggtacaaaccttcggcgaacaagtgttcgag
attattgaacacaaagccgagcgcctcaccgaattagacggcatcggccccaagcgcaaa
gcgcgagtcattcaatcctgggcggaacaaaaagctgttcgcgccattatggtattttta
caatcccagggcgtgggtagcgccagggcggttcgcatttataagacctacggcgatcac
gccatcgaacaggttcgcgagaatccttaccggctggcgttagacattcatggtattggt
tttaaaaccgccgacaggattgcccaacggctaggaattcccgctgattcccttatccgc
gcccaagcgggagtccgccatgtactccaggaattcgcaaccgaaggacattgcgcgatg
gagcgggaaaaattagcggacacagctagtcaattgctggaaatttccgtccctattatc
gaacatgccattgcccaagaagttactgaaggacaattcatcgacgagattattcatgac
aaaccctgcctatttcttgcctctctttatcgtgcggaaacaggcatcgccaaacattta
cagcgcctccttcagagtctccccccttggggagagatcaatacggataaggctattccc
tgggtggaagagaaaacaggattgcgcttctccccctcgcaacgtgcggcggttatacaa
gcggtcaggggcaaaatcactgttattagcgggggtccgggggttggaaaaaccactgtc
gttaatagcattctccgcattattcgagccaagcaaatccaggtccaccttggagcgcct
accgggcgagcggcaaaacggcttgctgagtccactggacttgaagccaaaacgattcac
cgtctgcttgaattcgatccccatgccatgggtttcaagcatcatggaggcaaccccctc
cacactgattttatcgttattgatgaagtttccatggtcgatgtgaaattgatgaatcaa
ctacttcaagccatccccacgcatgcggcatgcctgctaataggcgatagagaccagttg
ccttcggtagggccagggcaggtattagcggatatcatcgcttccaaaaaaattacgacc
gcccatctcaccgaagtttttcgccaggcggccaactctaaaatcgttgtcaatgcccac
cgaatcaatcaaggaaagatgcctgagagaacccatgaagcggccccgctcagtgacttc
tattttattcccactgagtcacctgaagccatccaggataggctcctagaattagtcacc
acgcggatacccaaacgcttcggctttgaccccatttgtgatattcaagtcctgaccccc
atgaatcggggcagtcttggaacacaagcgcttaatgcacttctgcaacagcaattcaat
ccccaagccggccccaaaatcaaccggttcggctggacctttgccccaggcgacaagatt
gttcagactgtcaataattatgacaaagaagtcttcaatggagatattggcagaataacc
cggatagatcctgagaagagcctcgtgtatatcagcatcgatgaccgcgaggtagaatac
gaactaggtgaacttgacgaaattgctttagcctacgctatctcggtgcataaaagccaa
ggttcagaatacccagcggttgtcattcccctagctacccagcactataccatgctacag
aagaatctcctctacacgggtgttacccgcggcaaaaagctggtcgttattgtggggcag
cctaaagcgcttgccatagccgttaaaaagtcccatgcaacctctcgcctgacccatctt
tcagcacggttagcgaacagttga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-NWA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (41)   

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