KEGG   Octadecabacter antarcticus: OAN307_c15110Help
Entry
OAN307_c15110     CDS       T02538                                 

Definition
putative ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
oat  Octadecabacter antarcticus
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:oat00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    OAN307_c15110
   03420 Nucleotide excision repair
    OAN307_c15110
   03430 Mismatch repair
    OAN307_c15110
   03450 Non-homologous end-joining
    OAN307_c15110
Enzymes [BR:oat01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     OAN307_c15110
DNA repair and recombination proteins [BR:oat03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      OAN307_c15110
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1502501..1504174)
Genome map
AA seq 557 aa AA seqDB search
MPMTATETRSDILCIQVVYRLCTQSVLPMKDFAVLFTAVDQSTKTTVKVAAMANFFSTAS
DSDKLWCIALFSGRRPRRVITTKLLRQWAAERAGLPLWLFEECYPIVGDLAETISLFLPP
SGGNEDRSLTDWILELKRLSTLDEAARKAGILAAWDALPQTECFLFTKLLTGGFRIGLSQ
KLMTRALAKATGQDEAALTHKLMGQWTPETVTWNSLIEVDGPNADLSRPYPFYLAYGLDD
LDQIGPSSDWFIDRKWDGIRGQFILRGGEHHIWSRGEDLMTDRFPELAQLRDCLPDGTVI
DGELLAFQNNTPMSFNALQKRIGRKNVPKKLLSEAPVILMAYDLLECRGVDIRGETLETR
RYLLENILNSTPTDAPIRISPEVNGDTWEDFKNERAKSRDLGAEGLMLKRRDSPYLAGRK
KGDWWKWKIDPLTVDAVMIYAQAGSGRRANLFTDFTFAVRNGNDLVPFTKAYSGLTDAEF
RQITHWVKRNTLQRFGPVRSVPAEHVFEIAFEGIQASPRHKSGIALRFPRMLRWRQDKPL
DEINTLDDLKEMLATYG
NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt
atgccaatgacggcgacggagacacgcagtgacatcttgtgcatacaagttgtgtacagg
ttgtgtacgcaaagtgtactgccgatgaaggactttgcagtcctgttcaccgccgtggat
cagtccaccaaaacgacagtaaaagtcgccgcaatggccaacttttttagcaccgcatcg
gacagtgacaaactatggtgcattgccttgttttctggtcgccgcccacgccgcgtcatc
accacaaaattgctgcgccaatgggccgccgaacgcgccggattgccgctgtggttgttt
gaggaatgttacccgattgtcggcgatctggctgaaaccatcagcctgttcctgccgccg
tctggcgggaatgaggatcgctccctaaccgactggattttggaattaaaacgcctttca
acgctggacgaagccgcccgaaaagcaggcatcctcgccgcatgggacgcgttgccccaa
actgaatgttttttgttcacgaaacttctcacgggcgggttccggatcggccttagccag
aaattaatgacccgcgctttggcaaaagccacggggcaggacgaggccgcattaacccat
aaactcatgggccaatggacgcccgaaacagtgacctggaacagcctgatcgaagttgac
ggtccaaacgcggatctgtcgcgtccatacccgttttatctggcatatgggttggatgat
ttagatcagattggcccgtcaagcgattggtttatcgatagaaaatgggatggcatacgc
gggcaattcatcctccgcggtggtgaacaccacatctggtcgcgcggcgaagacctcatg
actgaccgctttccagaactcgcgcagctgcgcgattgcctgcccgatggaacggtcatc
gacggggagcttttggcgtttcaaaacaacaccccgatgtcatttaatgccctgcaaaaa
cggataggacgaaagaatgttccaaagaaattgctgtccgaagcaccggttattttgatg
gcttatgaccttcttgaatgtagaggcgtcgatatcagaggtgaaacattagaaacgcgc
cgctacctactggaaaatatactaaattccacacccaccgatgcacccatccgaatttca
ccagaagtcaacggtgatacttgggaagacttcaaaaatgagcgcgccaagtcacgtgat
cttggcgccgaagggttgatgttaaaacggcgcgacagcccttatttggcgggtcgcaaa
aagggcgattggtggaaatggaagatcgatccgctgaccgtcgacgcggtgatgatctac
gcgcaggccggatcgggacggcgcgcgaacctgttcacagacttcacctttgcggtcaga
aacggcaacgatctggtccccttcacaaaggcctattcggggctgacggacgcggaattt
cgccagattacccactgggttaaacgaaatacattgcagcgttttggcccagtccgttcc
gtccccgccgaacacgtctttgaaattgcgtttgaggggatacaggcatcaccgcgacat
aaatcaggcattgcgctgcgcttcccgcgcatgcttcgttggcgccaagacaaaccactg
gatgaaatcaacaccctagatgatctaaaggaaatgctggcgacttacggatag

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