KEGG   Lacunisphaera limnophila: Verru16b_00834
Entry
Verru16b_00834    CDS       T04567                                 
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
  KO
K08316  16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Organism
obg  Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:obg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:obg03009]
    Verru16b_00834 (rsmD)
Enzymes [BR:obg01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     Verru16b_00834 (rsmD)
Ribosome biogenesis [BR:obg03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Verru16b_00834 (rsmD)
SSDB
Motif
Pfam: Cons_hypoth95 MethyltransfD12 RsmJ 2Fe-2S_Ferredox
Other DBs
NCBI-ProteinID: AOS43776
UniProt: A0A1D8ASE6
Position
complement(1013563..1014132)
AA seq 189 aa
MRITGGLARGIPLTLPKGDAVRPATDAMRQAVFSSLAARVEGARFLDLFAGSGAYGLEAL
SRGAAGGIFVEKDARTAGFIRQNLAAVCKSLGRTTDGLQVVTADATLVQPGEPPDLVFID
PPYDLIAAVGPKLFARLDELLARQADPLVIFEMPGELALAPAGWTCVKRLGKGARQPTVA
IFRANRALP
NT seq 570 nt   +upstreamnt  +downstreamnt
atgcgcatcaccggaggactagcccgcggcattccgctcaccctgcccaagggtgatgcg
gtgcggccggcgacggatgcgatgcggcaggcggtgttctcgagcctggcggctcgggtc
gagggggcgcgtttcctcgacttgtttgccggcagcggggcttacgggctggaggccttg
agccgcggtgccgccggcgggatctttgtggaaaaggatgcccgcacggccggtttcatc
cggcagaacctcgccgccgtgtgcaagagtctcgggcggacgaccgacggtctgcaggtc
gtgacggccgatgccaccctggtgcaacccggcgaaccaccggatctggtgttcattgat
ccaccttacgacctgatcgccgcggtcggacccaaactctttgcgcggctcgacgagttg
ctggcccggcaggcggaccccttggtgatttttgaaatgcccggcgaactggcgctggct
cccgcgggttggacctgcgtgaagcggctgggcaagggtgcccgccagcccaccgtggcg
atcttcagggccaaccgagccttgccttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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