KEGG   Octopus bimaculoides (California two-spot octopus): 106870733
Entry
106870733         CDS       T04127                                 
Name
(RefSeq) nucleoporin NDC1-like isoform X2
  KO
K14315  nucleoporin NDC1
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106870733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obi03019]
    106870733
Messenger RNA biogenesis [BR:obi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106870733
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 106870733
NCBI-ProteinID: XP_014772393
EnsemblRapid: LOC106870733
Position
4:complement(84085569..84141823)
AA seq 572 aa
MLSSNGLTIDQWFYYEVHRWRCGASIWWSSVIAIIVSLAYIVITYFLQLSDYFGAYFTLR
ALCFTILAVSLHAILAVYNSHHYTVVPQISTTRLNNVLEFFRIQYILQGFIYTISSMLIT
VFASWIMKDSFSTLAVPCAEDSPAIYLNDNKLFLLTAAIYHGLLFHLRFYRNQYNYTPFK
IIQQAKFFQVKSQLVPVLFESAAQIFKQLLGFYLIFYFLGHLPRDLTAHLCRLSICPETN
LSSVQSLLQPELFLQSFFLGTYMYFIWHLAAVLLRTYLTESYEFRIEPGLDHLSDKCLHN
ALSCKSNPWIQYLGFLDLFQLSRFSFNRRQVLFSATFPGCHPKNWSQIYHICLENLRQLK
DATQEFNHNAFVQAAIPQQNTPNWLHNSSLSASRYLKPTSLGHMSLNESVTGTSLREERP
IKVSLQTKILEVLKKKPVFGYFLRELPDAAPRKLFSSVQIHIWAVEALSRLVAASYTEDA
LGIVQQNLPEILNVLVSLFENVERHFKLTSTLGRRSLTGVNCSHDLALRHAFRSALKSAI
YRIVDTFGKCVLDFRLSLETQRRLKLFLEYKE
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgttgtccagcaacgggttaacaatagaccagtggttctattatgaggtgcatcgttgg
cgatgtggtgccagtatttggtggtcttctgtcatagcaatcattgtctcactagcttat
attgttataacatactttcttcagctgtcagattactttggagcctatttcactctaaga
gccctctgttttactatacttgctgtctctctgcatgccatattggctgtctataattca
catcactatacagtggttcctcaaatatcaacaaccaggcttaataatgtcttggagttc
ttccgcatccaatatattctccagggatttatctataccatttccagtatgctcatcaca
gtatttgcttcatggataatgaaggactctttctccacactggctgttccctgtgcagaa
gatagccctgccatctacctgaatgacaacaaacttttcttactgactgcagccatttat
catggattgttgttccatctaaggttttataggaatcagtacaactatacacctttcaaa
attatacagcaagccaagttctttcaagttaaaagtcaactagttccagtattatttgaa
tctgctgctcaaattttcaaacagctgctaggtttttacctgatattctactttcttgga
catcttcctcgagacttaactgctcatctctgtcgactctcaatctgcccagaaacaaat
ttgtccagtgttcagagtcttcttcaaccagaattgtttttgcagtcatttttccttgga
acctacatgtatttcatctggcatttagctgccgttttactaaggacatatttaactgag
agttatgaatttcgtatagagcctggtttagatcatctatcagataaatgtttgcacaat
gctcttagctgcaagagcaacccttggattcagtacctcggctttctggatctcttccaa
ctgtccagattctccttcaatagacgtcaagttcttttcagtgcgacttttccagggtgc
caccccaaaaactggagccaaatctatcatatatgtttagagaacctacgtcaactaaag
gatgctacccaagaatttaaccacaatgcatttgtgcaagcagccattccacagcaaaac
acacctaattggttgcacaactcaagcctgtctgcaagtcgctacctcaagccaacatct
ttgggccacatgagtcttaatgaatcagtaactggtacatctctccgtgaagaaagacct
ataaaagtcagcttacaaactaagattttagaggtgttgaaaaagaagccagtgtttggt
tatttcctacgagaactaccagatgctgcacctcggaaattattctcctcagttcaaatc
catatctgggcagtagaagctctatcccgattggtagcagcctcctacactgaagatgca
cttggtattgtacagcagaacttaccagagatacttaatgttttggtatcactctttgag
aacgtggaaagacatttcaaactgacatcaactcttggacgtcgaagccttactggtgtc
aactgttcccatgacttagctcttcgacatgccttccgttctgctttgaagtctgccata
taccgaattgttgacacatttggaaaatgtgtcttagatttccggcttagtctcgaaacc
caaagacgcctcaagttatttctagaatacaaagaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system