KEGG   Octopus bimaculoides (California two-spot octopus): 106872060
Entry
106872060         CDS       T04127                                 
Name
(RefSeq) general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03022  Basal transcription factors
obi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106872060
  09124 Replication and repair
   03420 Nucleotide excision repair
    106872060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obi03021]
    106872060
   03400 DNA repair and recombination proteins [BR:obi03400]
    106872060
Transcription machinery [BR:obi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     106872060
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     106872060
SSDB
Motif
Pfam: BSD PH_TFIIH DUF3334
Other DBs
NCBI-GeneID: 106872060
NCBI-ProteinID: XP_014774390
EnsemblRapid: LOC106872060
UniProt: A0A0L8H913
Position
13:complement(33015872..33054287)
AA seq 555 aa
MAKTSEEVLLIINHVRHKKMDGSLYLMGERLAWMQVHKNSFSISHPYSDIKVQKISPGSK
EKVQLQILMHDGTANTFHFNHSQGREAQIRDRDAIKELLQQLLPQFRQKVNSELEEKNKL
LQEDPKLFQLYKDLVVSQLMSAEEFWANHSAKFSNSNNDKNQTVGVSAAFLADIKPQTDG
CNGLRYNLTPDVIESIFKTYPMVKKKHAENVPHKSSENEFWTKFFQSHYFHRDRINIGNK
DMFSECAKNDEDEIKQDIDRNVSDPFLDLTQIKDTSLGEGYGAMNEESQASTNLANLSII
RRFNYHSTMVLKTCQAQSRETAANASGDVSSTSLNGSDQTATKSKLNPSDASDQPTEKKA
RIMEKIHYTDLEEDTSSSATSLSLTKMERYLHGPTPISASLYSTNDNVVQAAQMVHQKLP
HWLPALSQVLPVHLALSVLGELSPGGSLMQRTSQQDLQQIIPFDTQEELQQIYSALCELL
RHFWSCFPASSKFLEEKVIKMKSTLERFHINKLNAFKEHLISQHYSINLTGHMEEMLNAA
YNKFETWQSKRLAKR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggctaagacttcagaagaggttctgttgatcataaaccatgttcgccacaagaagatg
gatggttcactttatttgatgggggagcgacttgcctggatgcaagtgcacaaaaattcc
tttagtataagccatccatactcagacattaaggtacaaaaaatttcccctggttctaaa
gagaaagttcagctacagattttgatgcacgatggcacagccaacacgttccacttcaac
cattcacagggtcgtgaagcgcagatcagggacagagatgctattaaggaacttctccag
caattattaccacagtttcgacagaaggttaacagtgagttggaggagaaaaataagctt
ttgcaggaagatccaaaactctttcagctctacaaagatcttgttgttagccaactgatg
tctgctgaagaattctgggctaaccattcagcaaaattttccaattctaataatgataag
aatcaaactgttggtgtttctgctgcttttttagcagatatcaaaccacagactgatgga
tgtaatggactcagatacaaccttacaccagatgttatagaatcaatttttaagacttat
ccaatggttaagaagaaacatgcagaaaatgttcctcacaaaagttcagaaaatgaattt
tggactaagttttttcagtcccattatttccaccgtgatcgcatcaatattggtaacaaa
gatatgttctcagaatgtgctaaaaatgatgaagacgagatcaaacaagacatagatcgt
aatgtgagcgatccgttcttggatttaactcagatcaaagatacatccttgggagagggt
tatggtgccatgaatgaggagagccaggccagcacaaatctggctaatctttcaataata
cgacgctttaactaccattccacaatggtgctcaaaacttgccaagcacaaagccgggag
acagcagccaatgcttctggtgatgtctcttcaaccagccttaatggcagtgaccaaact
gccacaaaatcaaaactgaacccttctgatgctagcgaccagccaactgaaaagaaggct
cgaatcatggagaagattcactacacagaccttgaggaagacactagctcatctgcaact
tcattgagtttgacaaaaatggagcgctatctgcatgggccaacacctatatcagcatct
ctatattcaaccaatgacaatgttgttcaggcagctcagatggttcaccagaaattgcct
cattggttaccagctttgtctcaggttcttccagttcatttagctctcagtgtgttggga
gaactctctcctggtggaagtttgatgcaaagaacaagtcagcaagatctacaacaaata
attcctttcgatactcaagaagaactccaacagatctacagtgcattgtgtgaactattg
agacacttttggtcctgttttccagcatcttccaagttcttagaagaaaaggttatcaag
atgaagtcaactttggagagattccatatcaataaactgaacgcattcaaagaacatttg
attagtcagcattattccattaatcttactggccacatggaggagatgttaaatgctgcg
tacaacaaatttgaaacttggcagagcaaacgccttgccaagagatga

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