KEGG   Oryza brachyantha (malo sina): 102699486
Entry
102699486         CDS       T02995                                 
Name
(RefSeq) tubulin alpha-1 chain
  KO
K07374  tubulin alpha
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04145  Phagosome
obr04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:obr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102699486
  09142 Cell motility
   04814 Motor proteins
    102699486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    102699486
   03036 Chromosome and associated proteins [BR:obr03036]
    102699486
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:obr04812]
    102699486
   04147 Exosome [BR:obr04147]
    102699486
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102699486
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     102699486
Cytoskeleton proteins [BR:obr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    102699486
Exosome [BR:obr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102699486
  Exosomal proteins of other body fluids (saliva and urine)
   102699486
  Exosomal proteins of colorectal cancer cells
   102699486
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 102699486
NCBI-ProteinID: XP_006650524
Position
3:24231014..24233809
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGGYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SIVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEFDEGEDGDEGDEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggagtgcatctcgatccacatcggccaggccggtatccaggtcggaaacgcgtgc
tgggagctctactgcctcgagcatggcatccaggctgatggtcagatgcccagtgacaag
accgttggtggaggtgacgatgcattcaacaccttcttcagcgagactggtgctgggaag
catgttccccgtgctgtctttgttgatcttgagcctactgtcattgatgaggtgaggact
ggtggctaccgccagctcttccaccctgagcagctcatcagtggcaaggaggatgcagcc
aacaactttgcccgtggtcactacaccattggcaaggagattgttgatctgtgccttgac
cgtatcaggaagcttgctgacaactgcactggtctccaaggtttccttgtgttcaatgct
gttggaggtggaactggctctggtcttggttccctcctcctggagcgcctctctgttgac
tatggcaagaagtccaagctcgggttcacagtgtacccatcccctcaggtctccacctct
gtggttgagccatacaacagtgtcctctccacccactccctccttgagcacactgatgtt
gctgtcctccttgataacgaggccatctatgatatatgccgccgctcccttgacatcgag
cgcccaacctacaccaacctcaacaggcttgtgtctcaggttatctcatccttgaccgcc
tccctgaggtttgatggtgctctcaatgtggatgtcaacgagttccaaaccaaccttgtg
ccctacccgaggatccacttcatgctttcatcttacgccccagtgatctctgccgagaag
gcctaccatgagcagctctccgtcgctgaaatcaccaacagcgccttcgagccatcctcc
atgatggccaagtgcgaccctcgccacggcaagtacatggcatgctgcctcatgtaccgt
ggtgatgtggtccccaaggacgtgaacgccgctgtcgccaccatcaagaccaagcgcacc
atccagttcgtcgactggtgcccgaccgggttcaagtgcggcatcaactaccagccgccc
agcatcgtccccggcggcgacctggccaaggtgcagagggccgtgtgcatgatctccaac
tccaccagcgtcgtcgaggtcttctcccgcattgaccacaagttcgacctcatgtacgcc
aagcgcgccttcgtccactggtacgtgggtgagggcatggaggagggcgagttctccgag
gctcgcgaggacctggccgcgctcgagaaggactatgaggaggtcggcgctgagttcgac
gagggtgaggacggcgatgagggcgacgagtactag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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