KEGG   Oryza brachyantha (malo sina): 102702237
Entry
102702237         CDS       T02995                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 3
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
obr  Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:obr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:obr03036]
    102702237
Enzymes [BR:obr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     102702237
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     102702237
SSDB
Motif
Pfam: RdRP DUF5496
Other DBs
NCBI-GeneID: 102702237
NCBI-ProteinID: XP_015697486
Position
1:complement(3959126..3976435)
AA seq 1184 aa
MRQPELPPAVEAELLRLEARLGQIACTEARQHLAGLGEEAAARVLRKIGXSQRVRTLSGF
VSHMASRERMRRNARDIPAAHSFAAHPREEEFVPTSMYMNEDHMDVQSPNNAIAFGLPNH
AIVEAGSPNQPFSLYGSGGSVRQISRLVPDLARLTVESPCYQLSSVLQNLSYIEVDTPAQ
AMASPVWNQMAEQIDSPARATVPAVPNDVMMQEMPNYIEIDDSPMQPLISTPRRGSTLIP
VQDLSRRIENMAGPSGSPLSATTRHATANPLRDSVSPQMLALEELEFKKIFMIFAYLGWL
VSGQHTIFSSCYSNKIETVLSVDYIRSLXFMPMAQFESKIWRTFGYKNIAVSDRAKNLDS
DPLTTKVYHCNVEIRGDSVVTLFKGPYIGNTRTHLQKVVGDDNVLVVKFMEKLSETKTDF
STYCEHYHKVANDGILLGLRRYQFFIYKDGGKEKKMIEGEKRNSSSTVRCYFVRTESGWN
TDEPYILSGKTVGQARELFMHINTAPTLAKYMARLALILSKTITLDADLSQVLVRLIDEP
CLDEHGNVVLRDGEPLIRTDGTGLISEDLALKCPTSIFKGKFLKSQGIATCDEGETMMKP
NSLKRHRSLAAKHPLLMQFRLFYYGSAVKGTVLVDRRLSPGNILVRPSMLRSYPELSDVQ
SVNSSEIVFARNAKKSLSGVQSVNSFEIVSTSNXPRRTLTSRFLIALLCYGGVPEEYFLE
LLENAIEGAENACYYYEDALKIAFSYADMEDSISARMILSGIPLEESYLQSRLAFMARQE
RKGIKQGKIPIDECYYLMGTTDPTGTLGPNEVCVILENGQLCGDVLVYKHPGLHFGDIHV
LKATYIKDLEKKYVGYSKYAILFPTSGPRSLADEMANSDFDGDMYWVSKNPKLLEHFKPS
EPWVETITPKRRKQKKPQDFNESKLERLLFHEFLKTRFTPSYALGTAADSWLAYVDRXLT
GSLDESEKKIMKEKMTKLVDLYYDALDAPKTGNKVNIASGLITKRYPHFMGRIPSYHSSS
ILGQIYDRAEDIESLRYDNVAPSGISLLPCFTERDAPPETKRLWQQRYEEYLTDSRLLYE
VDKEERNMKFQKLYEKYKRMLYDASEFEQTPRGFDDVFTEACVIYQIVYEEARSYGGDAG
RCGFAWKVAGRALRHFYALKNEGDTVLCSLPLLRRFKFIRKDHR
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgcggcagccggagctcccgccggcggtcgaggcggagctgttgcggctggaggcgagg
ctgggccagatcgcctgcacggaggcgcggcagcacctcgcgggcctcggcgaggaggcg
gcggcgcgggtgctccggaagatcgggnagtcgcagcgggtgcggacgctgtcgggcttc
gtcagccatatggcgagccgggagaggatgaggcgcaacgcgcgggacatccccgccgcc
cacagcttcgccgcccatccccgggaagaggaattcgtacccacgtcaatgtacatgaat
gaggatcatatggatgttcaaagccccaacaatgcaatagctttcggtctcccaaaccat
gccattgtggaggctgggagtcccaaccaaccgttcagcttgtatggcagtggtggttct
gtcagacaaatttctcgtctggttccagacctggctaggctgaccgttgagagcccatgt
tatcagctgtcttctgtgctgcagaacctgagctacattgaagttgatactcctgcccag
gcaatggcttctcctgtgtggaaccagatggctgagcagattgacagtcctgctcgagca
acggttcctgccgtgcctaatgatgttatgatgcaggaaatgccgaactatatagagatt
gatgacagccccatgcagccgctgatttctactccaagaagaggttccaccctgatccct
gtgcaggatctttcaagacgcattgagaatatggctggcccctcaggaagtccactgagc
gcaactactcgtcatgccacagccaatccactgagggactcagtgagtcctcagatgctg
gcactggaagagttggagtttaagaaaatatttatgatttttgcttaccttggctggtta
gtttctggccaacacactattttctcctcatgttacagtaataagatagaaactgttctg
tctgtggactatattagatccttgtagttcatgcccatggctcaatttgagtcaaaaatc
tggaggacatttggttacaagaacattgcagtttcagatagagcaaagaaccttgattca
gatccacttacaacaaaagtctaccattgtaatgttgagataagaggggactctgtagtc
acactcttcaagggaccatatattgggaatacaaggactcatttacagaaagttgttggt
gatgataatgtccttgtagtaaaatttatggagaaactatcagaaaccaagactgacttc
tctacatattgtgaacattaccataaggttgctaacgatggtattcttttgggtttgcgg
cgttatcaatttttcatttataaggatggaggaaaagagaagaaaatgatagaaggggag
aaaaggaatagcagttcaactgttagatgctactttgttcgcactgagtctgggtggaac
acggatgagccgtatatactctctggcaaaacagttggacaggcccgtgaactattcatg
cacataaatactgcccccaccttggcgaaatatatggccaggcttgctttgatactttcc
aaaactatcacattagatgctgatttatcacaagttcttgtcaggctgattgatgaacct
tgcttggatgaacatggcaatgttgttcttagagatggggagccgttgattcgtactgat
gggactggccttatatctgaggatttggccttgaaatgccctacaagtatcttcaaggga
aaatttttgaagtcacagggtatcgcaacttgtgatgaaggagaaacaatgatgaagcct
aacagtttaaagaggcatcggtctcttgccgctaaacatcctcttcttatgcagttccgt
ttgttctattatggatctgctgtgaagggaacagtcctagttgacaggcggctttctcct
ggaaatatacttgtccgaccatcaatgctgagaagttatccagaattatctgatgttcag
tctgtcaactcatcggaaatagtctttgctcgaaatgccaagaaaagtctatctggtgtt
cagtctgtaaattcttttgaaatagtctctacaagcaattgaccgagaaggaccttaaca
tcaaggttcttgatcgcattactttgctatggaggagttccagaagagtattttttggag
cttcttgaaaatgcaattgaaggggctgagaatgcatgttattattatgaagatgcactg
aaaattgcattcagctatgctgacatggaggattcaatctcagcacggatgattctttct
ggaattcctctagaagagtcatatttgcaatctaggctggctttcatggctcgacaggaa
aggaagggaattaagcaaggaaagataccaattgacgagtgctattatttgatgggtact
acagaccctacaggaacacttggacctaatgaagtctgcgtgatacttgaaaatggtcag
ctttgcggggatgttcttgtttataaacatcctgggttacattttggtgatatacatgtc
ttgaaagcaacatatattaaggatctagagaaaaagtatgtgggatattctaaatatgca
atactctttcctacttctggaccacggtctttggctgatgagatggccaatagtgatttt
gatggcgacatgtactgggtttcaaaaaacccaaagttattagaacacttcaaaccttct
gaaccatgggtagaaacaattacaccaaaaaggagaaagcagaagaagcctcaggatttt
aatgaatccaaacttgaaaggctgttatttcatgaattcttgaaaacaagatttacaccc
agttatgcacttggtacggcagctgatagctggttagcatatgtggaccggntattaacg
ggttcacttgatgaaagtgagaaaaaaataatgaaggaaaagatgactaagttagttgac
ctgtattatgatgccttagatgctccaaagactggaaacaaggtcaatattgcaagtggt
ctgattacaaagcgatatccccacttcatgggtcgcattccttcgtaccattcatcatcc
atacttggacaaatctatgatagagcagaagatatagaatctctacgatatgataatgtt
gcaccaagcgggatatcgctgctcccatgcttcaccgagagagatgcacccccagaaacc
aagcgcctctggcaacagcgctatgaggagtacctgaccgacagtagactgctctatgag
gtagacaaagaagaaaggaacatgaagtttcagaaactctatgaaaagtacaagcgcatg
ctctacgacgcatcggaattcgagcagacgccgaggggcttcgacgacgtgttcacggaa
gcctgcgtgatctaccagatcgtctacgaggaagcacggtcttacggcggcgacgccggc
cggtgcggcttcgcctggaaggtcgccggccgcgcgctgcgccacttctacgcgctcaag
aacgagggcgacaccgtgctctgctcgctgccgcttctccgcaggttcaagttcatcagg
aaggaccatcgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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