KEGG   Oryza brachyantha (malo sina): 102705257
Entry
102705257         CDS       T02995                                 
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102705257
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:obr03400]
    102705257
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     102705257
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD
Other DBs
NCBI-GeneID: 102705257
NCBI-ProteinID: XP_015693311
Position
5:12145963..12152653
AA seq 1417 aa
MDRAARLARRRGGGGGGGGGGGETVPKPRRKGRHGDAGPPIVIDIDDGEAEEEEGVGGGA
AAVAAPPVGAVATRTRSRRMAMMVMVRAPATPVVAEPPPPPLLLPTPSGKRRRRKGAGGE
GSRSAGPSREKRRVRSRRSSGSSADGVRARKRKEAEVEAEAEAGALASGGWVEGSPLDGG
ESSGRADDASRNGYGEARVWNADGTDQGDEEHRSVSGGDRTEEHCGNGEVSVVNSNHDGG
GQNGCFDTDEEIIAGTDTGDCENTELAVVDSINEELVAPYEDEYDDELLEEKLVGDVIRA
YSNGANLDANGVDWEAEDEMEFDDDNDNDYDDNDDSRGDADEGDKSVQMHDFSKIEAQDF
VNHNVDGVRRHEDEEVLKDEMELKGEGTLSYNEGSLHIEILDSDEEVKVVKDTRNFSRRK
SLAQPKLPIAPSCVAWRTRSSWGMKEERFSYNTYFETLSDEPKEDDEDTDVELDDEDDDD
EDNSASCDEEEEEERKEEEEEAQRRKQKKGIDSSDDEMIDDAVDCGIDWEDDDYPEVDFT
RPLNFNKYGSEAPVGSEAFTEQQKRSRFTWELERRKKLKLGIMKNHRLYERDLESDSNSS
SSSQNKKNGCQGSGDRRTGRKRKNLLSKSDKKSSRMLKRQSLLKLLMDKMCSNDDRKSSP
FDQNPQIEYSFKDLHPLVFSFGDDDPIPTDRPEPAAAIDMLWADLDFTLESENIGTYYDD
EGQQSSLLDLALAPITPCSRGKHEFIIDEQIGIRCKYCSLVNLEIRFILPLLASNFAEKP
AWRNSSCLKTALMCPDLYEQTGAGDGQSQDFHINGTVWDLIPGVITSMYQHQREAFEFMW
TNLVGDIRLNEIKHGAKADVVGGCVICHAPGTGKTRLAIVFIETYMKVFPDCRPVIIAPR
GMLFAWEQEFKKWNVNVPFHIMNTTDYSGKEDRDICRLIKKEHRTEKLTRLVKLFSWNKG
HGVLGISYGLYMKLTSEKSGCTGENKVRSILLENPGLLVLDEGHTPRNERSVIWKTLGKV
TTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLTKTRVGRRHHVSKKQRDKFSDKYE
KGVWASLTSNVTDDNAEKVRSILKPFVHIHNGTILRTLPGLRECVIVLKPLPLQKSIIRK
VENIGSGNNFEHEYVISLASTHPSLVTAINMSEEEASLIDKPMLGRLRSNPYEGVKTRFV
MEVVRLCEALKEKVLIFSQFIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQNSIE
VFNNPDSEARVLLASTRACCEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVY
TYNLITYGTGEGDKYDRQAEKDHLSKLVFSTEDEFNNVRNMLSKAEMEHCSKLISEDKVL
EEMTSHDQLKGMFLKIHYPPTESNIVFTYNQIAPELS
NT seq 4254 nt   +upstreamnt  +downstreamnt
atggatcgcgccgcgcggctcgcccgccgccgcgggggcggaggcggaggcggaggcgga
ggcggagagacggtgccgaagccccgccgcaaggggcggcacggcgacgcggggccgcca
atcgtcatcgacatcgacgacggggaggcggaggaggaggagggcgtgggtggtggagcg
gcggcggtggcggcgccgcctgtgggggccgtggcgacgcggacgcgatcgcggaggatg
gcgatgatggtgatggtgcgggcgccagccacaccggtcgtggcggagccgcctccgccg
ccgctgttgctgccgacgccgagcgggaagaggaggaggaggaagggggcgggcggcgag
gggagcaggagcgcggggccgtcgagggagaagcggcgcgtgcgctcgcggcgatcctcg
ggatcatcagcggacggggttcgggcgcgcaagcgcaaggaggcggaagtggaagccgaa
gcagaggcgggagctctcgcctccggaggatgggtggaggggtctccacttgacggaggt
gagagcagcgggcgtgccgatgacgcttcgcgcaatggctatggcgaggctcgcgtttgg
aatgcggatggcactgatcaaggagacgaggaacatcgcagtgtttctggtggggatcga
accgaggagcattgcgggaatggggaagtcagtgttgtcaattcgaaccatgatggaggt
gggcagaatggttgttttgacacggacgaggagatcattgctgggacggacacgggggat
tgtgagaacacggagttagcagttgtggattctatcaatgaagagttggtggcgccatat
gaggatgaatatgacgacgaattgttggaggaaaagcttgttggagatgtcattcgtgct
tacagcaatggtgctaatttggatgcgaatggagtggactgggaagctgaggatgagatg
gaatttgacgatgataatgataatgattatgatgacaatgatgattctaggggtgatgct
gatgaaggtgacaaatctgtacaaatgcatgacttttcaaagatagaagcacaagatttt
gtgaaccacaatgttgatggagtgaggcgtcatgaggatgaggaggttctcaaggatgag
atggagttgaagggagaaggaactctcagttataatgaagggagcttgcatatagaaatt
cttgactctgatgaggaagtcaaagtggtcaaggacacaagaaatttctcaagaagaaag
tcgttagcgcaaccaaagctaccgattgcgccatcttgtgttgcatggagaactcggtca
tcatggggtatgaaggaagaaaggttttcgtacaatacatattttgagacattgtctgac
gagccaaaagaggatgatgaggatactgatgtggaattggatgatgaggatgatgacgat
gaggacaatagtgctagctgtgatgaagaggaagaagaggaaagaaaggaggaagaggaa
gaggctcaaaggagaaagcaaaagaaagggattgactcatctgatgatgagatgattgat
gatgctgtagattgtggcattgactgggaggacgatgattacccagaggttgattttact
cgaccacttaactttaataaatatggcagtgaggcccctgttggcagcgaggctttcaca
gagcaacagaagagatcaagatttacatgggagcttgagaggaggaaaaaactgaagctt
ggaataatgaagaaccatcgtttatatgaacgagacctggaatccgattccaactcatcc
agttctagccagaataaaaaaaatggatgccaagggagtggtgatcgcagaactgggagg
aaaaggaagaatctattatcaaagtctgataagaaatccagccgcatgctaaagcgacaa
tctctcctgaagcttctgatggacaagatgtgtagcaatgatgataggaagtcttctcct
tttgaccagaatccccagattgagtatagtttcaaggatttgcatccattggttttttca
tttggggacgacgatcctataccaactgataggccagagccagctgctgcaatagacatg
ctatgggctgatttagacttcactttagagtcggagaatattgggacttattatgatgac
gagggtcaacagagcagtctgctagatcttgcgcttgctcctattacaccttgttctaga
gggaagcacgaattcattatcgacgagcaaataggaatcagatgcaaatactgctccttg
gtaaatctggaaatcagatttattttaccattactggcctccaatttcgcagagaaacct
gcatggcgaaatagctcttgtttgaagactgcattaatgtgtcctgatctttatgagcaa
acaggggctggtgatggacaatctcaagattttcatataaacgggactgtgtgggatctc
attcctggggtcattactagtatgtatcagcatcaacgtgaggcatttgagtttatgtgg
acaaatctagttggtgatattaggcttaatgaaataaagcatggcgctaaggctgatgtt
gttggaggatgtgtgatctgtcacgccccaggcacaggaaagacccgtttggctattgtg
tttatcgagacatatatgaaggtattcccagattgccgaccagtgattattgcacctcgt
gggatgttgtttgcttgggaacaagagttcaagaaatggaatgtcaatgttccttttcat
ataatgaacaccactgattactctgggaaggaagacagagacatatgtaggttaataaag
aaagagcatcggactgaaaaattgactcggcttgtaaaactgttttcatggaacaagggt
cacggtgttcttggaataagttatggtctatatatgaaactaacatctgaaaagtctggc
tgcactggagaaaacaaagtgagaagcattcttcttgagaaccctggtttgcttgttctt
gatgaagggcacacacctaggaatgaacgcagtgtcatctggaagacactaggaaaagtt
acaactgagaagcgtataattctatctggaactcctttccaaaataattttcttgagctt
tacaatattctctgtttggtgaggcccaggtttggtgaaatgtttttgactaaaacaaga
gtgggtcgaaggcatcatgtctctaagaagcaacgggataaattttctgataaatatgag
aaaggagtttgggcatccttaactagtaatgtaactgatgataatgcagaaaaggtaaga
tcaatattgaagccattcgttcatattcataatgggactattcttcgaactcttccgggg
cttagagagtgtgtgattgttctgaaacctctaccacttcaaaagagtatcattagaaag
gtggaaaacattggatctggtaacaattttgaacatgaatacgttatttctttagcttcc
acacatccttcacttgtaactgctatcaacatgtctgaagaggaagcttcacttatcgat
aaaccaatgcttggaagattaaggtctaatccttatgaaggggtaaaaacaaggtttgta
atggaagttgttcgtctatgtgaagcgctgaaagaaaaagtattgatttttagtcaattt
attcagccattggaactgataaaggaacatcttcgtaagtttttcaaatggagagaagga
aaggagattctccaaatggatggtaagatccttccaagatatcgtcagaattcaattgag
gttttcaataatccagatagtgaggcgagggtgttacttgcatctacaagagcttgttgt
gaagggattagtctaacaggggcttcgagagttgttcttctagatgttgtttggaatcca
gctgtcggaaggcaagctatcagcagagcatttaggataggacagaagaaatttgtatat
acatacaatttaataacttatggaacaggtgaaggtgacaaatatgataggcaagcagaa
aaggatcacctgtccaaattggtcttctctacagaagatgagttcaataatgttaggaac
atgctatcaaaagctgaaatggagcattgttctaagctgatatctgaggataaggttctt
gaggaaatgacttcccatgatcagctgaaaggcatgtttttaaagattcattatccacca
actgagtcaaacattgtttttacttacaaccagattgctcctgagttaagttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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