KEGG   Oryza brachyantha (malo sina): 102723029
Entry
102723029         CDS       T02995                                 
Name
(RefSeq) transcription initiation factor IIB-2-like
  KO
K03124  transcription initiation factor TFIIB
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102723029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obr03021]
    102723029
Transcription machinery [BR:obr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     102723029
 Prokaryotic type
  Archaeal type
    TFB
     102723029
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Ribosomal_S27e zf-ribbon_3
Other DBs
NCBI-GeneID: 102723029
NCBI-ProteinID: XP_006649548
UniProt: J3LKX4
Position
3:4137601..4138707
AA seq 313 aa
MCCDDGNEEAYCSDCRATTVVVLDHATGDTICTSCGLVLEARYVDETSEWRTFSGDNGGE
DRDRSRVGASDPFLAHALGTVVAPAKQQANAAGAAAGTSLWHAARVDSEARSGQDNALLA
GFRAISDMADRLGLVSTIRDRANELLKMLEGAKLCKRGQHRDTTYAACLNIACRNEGKPR
TLKELTSVMRAGYDKKEIGRMSKIIRTYLGEEAGQAMEVGVVCAADYMARFGSRLGIAAA
ELRAAQRAAQVLDEKLDVRRNPESIAAAIIYMVAQRAGAKTSARDVSTVTGVAEATIKEA
TKELNEHAELLFT
NT seq 942 nt   +upstreamnt  +downstreamnt
atgtgctgcgacgacgggaacgaggaggcctactgctcggactgccgcgccacgacggtg
gtggtgttggaccacgccaccggcgacaccatctgcacctcgtgcgggctcgttctggag
gcgaggtacgtcgacgagacctccgagtggcgcacgttctccggcgacaacggcggcgag
gatcgtgaccgcagccgcgtcggcgcctccgacccgttcctcgcgcacgcgctcggcacc
gtcgtcgcccccgccaagcagcaagcgaatgccgccggcgccgccgctggcacgtccctg
tggcatgccgcacgcgtcgactcggaggcgaggtcgggacaagacaatgcgctgctcgcc
gggttccgcgccatctcggacatggcggatcgcctcgggctcgtgagcaccatcagagac
cgtgccaacgagctactcaagatgctggagggggccaagctctgcaaaaggggccagcac
cgcgacaccacgtacgccgcctgcctcaacatcgcctgccgcaacgaggggaagccacgg
acgctcaaggagctgacctcggtgatgcgcgccggctatgacaagaaggagatcgggagg
atgtccaagatcatcaggacgtacctcggggaggaggccgggcaggcgatggaagtcggt
gtggtgtgcgccgccgactacatggcccgcttcggctcgcggctcgggatcgccgcggcg
gagttgcgcgcggcgcagagggcggcgcaggtgctggacgagaagctggacgtgcggcgc
aacccggagtccatcgctgccgccatcatctacatggtagcgcagcgcgccggcgccaag
acgtccgcgcgcgacgtgtcgacggtcaccggcgtcgccgaggcaaccatcaaggaggcg
accaaggagctgaacgagcatgctgagcttctcttcacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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