KEGG   Opitutaceae bacterium TAV5: OPIT5_03425
Entry
OPIT5_03425       CDS       T03683                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
obt  Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:obt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:obt03016]
    OPIT5_03425
Enzymes [BR:obt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     OPIT5_03425
Transfer RNA biogenesis [BR:obt03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    OPIT5_03425
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AHF89459
UniProt: W0IYD5
Position
complement(682470..683597)
AA seq 375 aa
MLGVKIPARPPSFQLIDQPAQLAPLLAAIDRVDEVALDTEADNMYHYHTRVCLLQFLVDG
DVYLVDLMPPLPLAPLWEKLSKKHLVMHGSDFDLRLLHDLCEFRPKSLFDTMLAAQLLNR
KRIGLAALLSDHFGVTLDKGGQKANWSRRPLTAKLLDYASLDVWHLFELRDILTRELGRL
GRLEWLDQQCRRQIESGALGFPDDDEHAWRVGPVDRLRGRGLGTLHAVWHWREEWAEKLD
VPPFKVCNNDFLFRMALAAERGDAPESILATVNLGKRHGRLAPSLAAAVRAGYARDPQTL
PRRPRAERTSLSVEETARQDRFKAVRDQVAAKLELDPTLIANRSQLVQIARDPARIGEVL
LPWQAELLRPETGRA
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgctcggagtaaaaattcctgcccgcccgccgtctttccagttgatcgaccagcctgcg
caactcgcgccgctccttgccgccatcgaccgcgtcgacgaggtcgccctcgataccgag
gcggacaacatgtaccactaccacacgcgggtgtgcctcctgcaatttctcgtcgacggc
gatgtctacctcgtcgacctgatgcccccgctgccgctcgcgccgctctgggaaaagctt
tcgaaaaaacacctcgtcatgcacggcagcgatttcgatctgcgcctgctgcacgacctc
tgcgagtttcgcccgaaaagcctgttcgacacgatgctggccgcccagcttctcaaccgc
aaacgcatcggtctggccgcgctcctctccgatcattttggcgtcacgctcgacaagggg
ggccagaaagccaactggtcccggcgcccgctcaccgccaagctcctcgattacgcctcg
ctcgatgtctggcaccttttcgaactgcgcgacatcctcacccgcgaactcggccggctc
ggccggctcgagtggctcgaccagcaatgccggcgccagatcgaatccggcgcgctcggt
ttcccggacgatgacgaacacgcgtggcgggtcggcccggtcgatcgcctccgcggacgc
ggcctcgggaccttgcacgccgtctggcactggcgcgaggagtgggccgaaaagctcgac
gtgccgcccttcaaggtctgcaacaacgattttctcttccgcatggcccttgccgccgaa
cgcggcgacgctcccgaatccatccttgcgaccgtcaatctcggcaaacgccacgggcgc
ctcgcgccctcgcttgccgcggcggtccgcgccggttacgcgcgcgacccgcagacactc
ccgcgccgtccgcgcgccgagcgcacctcgctgtccgtcgaggagaccgcccggcaggat
cgcttcaaggccgtccgcgaccaggtcgccgcgaaactcgaactcgatcccacgctgatc
gccaaccgctcccagctcgtgcagattgcccgcgatcctgcgcggatcggggaagtcctg
ctgccctggcaagccgagctgctccggcccgaaaccgggcgggcctga

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