KEGG T00783: OCAR

Oligotropha carboxidovorans OM5 (Mississippi): OCAR_5241

Entry

OCAR_5241 CDS T00783

Gene name

murD

Definition

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)

Orthology

K01925

UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]

Organism

oca Oligotropha carboxidovorans OM5 (Mississippi)

Pathway

oca00471	D-Glutamine and D-glutamate metabolism
oca00550	Peptidoglycan biosynthesis
oca01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Glutamine and D-glutamate metabolism [PATH:oca00471]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:oca00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C IlvN ADH_zinc_N 2-Hacid_dh_C AdoHcyase_NAD TrkA_N

Other DBs

NCBI-GI:

209884381

NCBI-GeneID:

6991228

UniProt:

B6JCF7

Position

1216474..1217871

AA seq 465 aa
MIPITSFAGQTVAVFGLGGSGVASCRALKAGGAEVVAGDDSAERLAQAAREGFITADLRT
VSWENFAALILTPGVPLTHPRPHWTVEMARKAGIEVIGDIELFCRERRLHAPGAPFIAIT
GTNGKSTTTALTAHLMREAGFDAQMGGNIGTAILSLAPPAPQRVYVIEMSSYQIDLTPSL
DPSVGILLNVTEDHIDRHGSIEHYAEVKERLVVGVPRGGTAIVGVDDDFSTKAARAAEDT
GKHVVRVSVQRALDDGVFLDGERIVRGAAGGTAKLVDLNGIGSLRGRHNAQNAACAASAA
LALGVPFDVVQRGLASFPGLAHRMEQVGQKGEVLFVNDSKGTNADAAARALSSFTNIYWI
AGGKPKTGGIESLREFFPRIRKAYLIGEAAQEFSRTLEGVPQEISGTLDEAVPHAARDAA
ASGGHAVVLLSPACASFDQFPNFEVRGDYFRKLVLALGGVAPVKP

NT seq 1398 nt +upstreamnt +downstreamnt
atgatccccatcacttcctttgccggtcagacggtggccgtgttcggcctcggcggttcg
ggcgttgcaagctgccgcgcgttgaaagccggcggggcggaagtcgttgccggtgacgat
agtgccgagcgccttgcgcaggccgcgcgggagggtttcatcaccgccgatctgcgtacc
gtgtcgtgggagaatttcgcggcgctcattctgacgcccggcgtgccgctgacgcatccg
aggccgcattggaccgttgagatggcgcgtaaagccggcatcgaagtgatcggcgatatc
gaactgttctgccgcgagcgccgccttcatgcgccgggtgcgccgttcatcgccatcacc
ggcaccaacggcaaatcgaccaccacggcgctcaccgcgcatctgatgcgcgaggcaggc
ttcgacgcgcagatgggcggcaacatcggcaccgcgatcctgtcgctggcgccgcccgcg
ccgcagcgcgtctatgtgatcgagatgtcgtcgtatcagatcgaccttacgccctcgctc
gatccgagcgtgggcatcctgctcaacgtcaccgaagatcatatcgatcgccacggcagc
atcgagcattacgccgaggtgaaggagcgccttgtcgtcggcgtgccgcgcggcggcacc
gcgatcgtcggcgtcgatgacgatttcagcaccaaggcggcgcgggcggcggaagacacc
ggcaagcatgtcgtgcgtgtctctgtacagcgtgcgctggatgacggcgtgtttctcgat
ggcgagcggatcgtacgcggcgcggcgggcggcacggccaagctcgtcgatctgaatggc
atcggttcactgcgcggccgtcacaatgcgcagaacgcggcgtgtgcggcgagtgccgcg
ctcgcgctcggtgtgccgttcgacgtggtgcagcggggccttgcgagctttcccggcctc
gcgcatcgcatggagcaggtggggcagaagggcgaggtgctgttcgtcaacgattccaag
ggcaccaacgctgatgctgcggcgcgggcgctgtcgtcgttcactaatatttactggatc
gcgggcggcaagccgaagaccggcggcatcgaatccctgcgtgagttctttccacgtatt
cgcaaggcctatctgatcggcgaagcagcgcaggagttttccaggacgctcgaaggcgtg
ccgcaggaaatctccggtacgctggatgaggcggtgccgcatgccgcgcgcgatgcggcc
gcaagcggtggccatgccgtggtgctgctgtcgcccgcctgtgcctcgttcgaccagttt
ccgaacttcgaggtgcggggcgactatttccggaagctcgtgctggcgctcggcggcgtc
gcgccggtgaagccgtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

Download RDF

DBGET integrated database retrieval system