KEGG T00783: OCAR

Oligotropha carboxidovorans OM5 (Mississippi): OCAR_6566

Entry

OCAR_6566 CDS T00783

Definition

succinyl-CoA synthetase subunit beta (EC:6.2.1.5)

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

oca Oligotropha carboxidovorans OM5 (Mississippi)

Pathway

oca00020	Citrate cycle (TCA cycle)
oca00640	Propanoate metabolism
oca00660	C5-Branched dibasic acid metabolism
oca01100	Metabolic pathways
oca01110	Biosynthesis of secondary metabolites
oca01120	Microbial metabolism in diverse environments

Module

oca_M00009	Citrate cycle (TCA cycle, Krebs cycle)
oca_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:oca00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:oca00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:oca00660]

SSDB

Motif

Pfam:

ATP-grasp_2 ATP-grasp_5 Ligase_CoA GARS_A Med25_VWA

Other DBs

NCBI-GI:

209885686

NCBI-GeneID:

6990590

UniProt:

B6JE45

Position

complement(2508356..2509528)

AA seq 390 aa
MNLHEFQAKQILAGYGLPSPGGKVAITAEQAVAIYNELGGGDMAVKAQVHAGGRAQAGGV
KIVHSEKEAKAVATSLLGKKLVTAQTGPAGRVVRRIYLEKAVEPVRELHVALLIDGSSGT
LTLFGSARGGDDIEERAARGELRLERLSLGDGSKRQADNVAAFATRIRIDAGSVAAFEKI
VDGLRRAFVDLDASLIEINPLAILRDGSFQALDVKMVLEDNALFRHPDLTALRDEDEIDH
REVEAQRHQLNFVSMDGNIGVVANGAGLGLASVDLVCAAGGKPANFMDIRTTATSLDVAY
GFGLLLDNPATRAIFLNVHGGGMQPCDTIAEGLGIAMRRTGRSLPIVARLAGNNAEFARS
RFVNFGCPVVDCPDMWTAATKVVAIAQKGG

NT seq 1173 nt +upstreamnt +downstreamnt
gtgaatctgcacgagtttcaggccaaacaaatcctggcgggctacgggttgccctcgccg
ggcggcaaggttgccatcacagccgaacaggctgtcgccatttataatgagctcggcggc
ggtgacatggccgtcaaggcgcaggtccatgccggtggccgcgcacaggcgggcggcgtc
aagatcgtccattccgagaaagaggcaaaggcggtcgcgacctcgctgctcggcaagaag
ctcgtcaccgcgcagaccggcccggccgggcgcgtggtccggcgcatctatctcgaaaag
gcggtcgagcccgtgcgcgagctgcacgtcgcactcctgatcgacggctcctccggtacc
ctcacattgttcggcagcgcccgtggcggcgacgatatcgaggagcgtgccgcgcgcggc
gagttgcggctcgagcgtctcagcctcggcgatggctccaagcggcaggccgacaacgtc
gcggcttttgcgacgcgcatccgcatcgatgccggttcggtggcggccttcgagaagatc
gtcgatggcctgcgccgcgcctttgtcgatctcgacgcaagcctgatcgaaatcaacccg
ctcgcgatcctgcgcgacggcagcttccaggcgctcgacgtcaagatggtgctggaagac
aacgcgctgttccgccatcccgacctcaccgcactgcgcgatgaggacgagattgatcat
cgcgaggtcgaggcgcagcgccaccagctcaacttcgtcagcatggacggcaatatcggc
gtggtcgccaacggcgcgggcttaggccttgcgagcgtcgacctcgtctgtgcggcgggc
ggcaagcccgcgaacttcatggatatccgcaccacggcgacgagcctcgatgtcgcctac
ggcttcggcctcctgctcgacaatcccgcgacgcgtgcgattttcctcaatgtccacggc
ggcggcatgcagccttgcgacaccatcgcggaaggcctcggcatcgccatgcgccgcacc
ggccgctcgttgccgatcgtggcgcggctcgctggcaacaacgccgagttcgcgcgttcg
cgcttcgtcaatttcggttgcccggtcgtcgattgtccggacatgtggacggccgcgacc
aaggtcgtggccattgcgcagaagggaggatga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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