KEGG   Oceanimonas sp. GK1: GU3_03170Help
Entry
GU3_03170         CDS       T01667                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
oce  Oceanimonas sp. GK1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:oce00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GU3_03170
Enzymes [BR:oce01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GU3_03170
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GU3_03170
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
678543..679355
Genome map
AA seq 270 aa AA seqDB search
MPELPEVEVSRLGITPHLLGESVMRVVVRNPSLRWPVPAEIQELTGLTLTGIRRRAKYLL
LETDWGTAILHLGMSGNLKVLPHGTPAGKHDHVDIEFANGKLLRLNDPRRFGCLLWTREA
VEQHPLLARLGPEPLTDAFDGDYLYQRSRGRKTAIKQFIMDNQVVVGVGNIYANESLFDA
GIHPQREAGSISRARYLKLAEEIKTVLARAIGQGGTTLKDFTGSDGKPGYFVQELQVYGR
AEQPCVRCGGLLKEVRMNGRSTVFCGRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggagttaccagaagtcgaagtcagtcgtttgggcattaccccccacttgctggga
gagtcggtgatgcgggtggtggtgcgtaaccccagtctgcgctggccggtgccggcggag
atccaggagctgaccgggctgaccctgaccggaatccgccgccgggccaagtacctgttg
ctggaaactgactggggcaccgccattctgcacctgggcatgtccggcaacctcaaggtg
ctgcctcacggcaccccggcgggcaagcacgatcatgtagacatcgaatttgccaacggc
aagctgctgcggctgaacgacccccgtcgttttggctgcctgctgtggacacgggaagcc
gtagagcagcacccgctgctggcccggctggggccggagccgctgaccgacgcctttgac
ggcgattacctttaccagcgcagccgaggccgcaagaccgccatcaagcagttcatcatg
gacaatcaggtggtggtgggggtgggcaacatctacgccaacgagtcgctgtttgacgcc
ggcattcaccctcagcgagaagcgggcagcatcagccgggcgcgttatttgaaactggcc
gaggaaatcaaaaccgtgctggcccgggccatcggccagggcggcaccaccctgaaggac
tttaccggcagcgacggcaagccggggtattttgtgcaggagctgcaggtctacggccgg
gcggagcagccttgtgtgcgctgtggcggcctgctgaaggaagtgcgcatgaacggccgc
agcacggtgttttgcggccgctgccagcggtga

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