KEGG T01667: GU3

Oceanimonas sp. GK1: GU3_11345

Entry

GU3_11345 CDS T01667

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

oce Oceanimonas sp. GK1

Pathway

oce03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:oce03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Helicase_RecD AAA_11 Viral_helicase1 AAA_22 AAA_16 UvrD-helicase PhoH DUF2075 AAA_28 AAA_25 AAA_29 T2SE NTPase_1 FtsK_SpoIIIE AAA_18

Other DBs

NCBI-GI:

374336087

NCBI-GeneID:

11598152

UniProt:

H2FWP2

Position

complement(2467037..2469031)

AA seq 664 aa
MITTKTPASELLALLDRWVALGWLRPLDRALAGFFAEQQPESEAPVLLAAALASHQLGHG
HVCLDLLATLAEPDFALSLPPEGEEGLADAWLPSKQLATLTLEHWTQALARSPLVAADGE
PARPLVLSGDRLYLRRYWSYEQGVARALAARMQDDRAVPADLANWLERLFPEPLKLDGER
QTDWQKLACALAASSGFTLITGGPGTGKTTTVVRLLALLQGTAAQPLRIRLAAPTGKAAA
RLTESIGAQVASLPVDESVRARIPAEVSTLHRLLGSLPDSRHFRHHAGHPLPLDVLVVDE
ASMIDLEMMHCLLAALPPHARLLLLGDKDQLASVEAGALLGDLCRDAEQGLYTPERLAWL
EAVSGERVVHPSLRPGDAGRHALAQRILMLRYSRRFAGGSGIGRLAEAVNRQQPALARQQ
LEGSDEVATLRLKGEQDAALNRLLFAGRGEGVGYGHYLARLRDERPAAGTAFDGTAWHDW
AKGVLDAFDQFRLLCAVRRGPWGVEGLNARIAGLLHRRGLLEAEEGWYEGRPVLVTRNDY
GLGLMNGDIGIALRLPEQDGSMKLRVAFPRNDGSGGLRFVLPSRLGEVETVFAMTVHKSQ
GSEFAHTALMLPEALNPVLTKELLYTGITRARHRFTLVEPRAGVFEQAIARRVERRSGLL
ESLT

NT seq 1995 nt +upstreamnt +downstreamnt
atgatcaccaccaaaacccccgccagcgagctgctggccttgcttgaccgctgggtggcg
ctgggctggctgcgccccctggaccgggcgctggcgggcttttttgccgagcagcagccc
gaaagcgaggcgccggtgctgctggcggcggcactggccagccaccagctcggccacggc
catgtgtgcctggatctgctagcgaccctggccgagccggactttgccctgtcgctgccg
ccggaaggggaagaaggcctggccgatgcctggctgccttcaaagcaactggcgacactg
accctggagcactggacgcaggccctggcccgcagccccctggtggcggccgacggcgag
ccggcgcggcccctggtgctgagtggcgatcgattgtacctgcgtcgttactggagctat
gagcagggggtggcccgggctctggcggcacgcatgcaggatgacagagccgtgcctgcc
gacctggcaaactggcttgagcggttgtttcccgagccgctgaagcttgacggcgagcgc
cagaccgactggcaaaagctggcctgtgccctggcggcgagcagcggctttaccctgatc
accggcggccccggcaccggcaagaccaccactgtggtgcgcctgctggcgctgctgcag
ggcactgccgcccagcccctgcgcattcgactggcggcgcccaccggcaaggcggcggcc
cggctgaccgagtccatcggtgctcaggtggcctcgctgccggtagacgagagcgtgcgc
gcccggatcccggcagaggtgagcaccttgcaccgcttgttgggtagcctgccggacagt
cgtcattttcgtcatcatgccggccacccgctgccgctggatgtgctggtggtggatgag
gcctcgatgatcgatctggaaatgatgcactgcctgctggcggcgttgccgcctcatgcc
cggctgttactgctgggcgacaaggatcagctggcctcggtggaagcgggagccctgctg
ggggacttgtgtcgtgatgccgagcaggggttgtataccccggaacgtctggcctggttg
gaagcggtcagcggcgagcgggtagtgcacccgtccttgcggcccggtgacgccggccgt
catgccctggcccagcgcattctgatgctgcgttactcccgccgctttgccggcggctcc
ggcattggccggctggcagaggcggtgaaccgtcagcagccggcgctggcccggcagcag
ctggagggcagcgacgaggtggctacccttcggctgaagggagagcaggacgcggcgctt
aaccgcctgctgtttgccggtcggggggagggggtgggctatggtcattacctggcacgg
ctgcgggatgaacgtcccgccgccggcaccgcctttgacggtacggcctggcatgactgg
gcaaaaggcgtgctggatgcctttgatcagttccggctgctgtgcgcggtgcgccgaggc
ccctggggggtggaaggtttaaatgcacgcattgccggcctgctgcaccggcgcggcctg
ctcgaggcggaggaaggctggtacgaaggccggccggtactggtgacccgcaacgattac
ggcctggggctgatgaacggggacatcggcattgccctgcgcctgcccgagcaagacggc
agcatgaagctgcgggtggcctttccccgcaacgacggcagcggcggcttgcgttttgtg
ttgcccagccggctgggggaggtggagacggtgttcgccatgacggtacacaagtctcag
ggctcggagtttgcccataccgccctgatgttgcccgaggccctgaacccggtactgacc
aaggagctgctctataccggcattacccgggcccggcaccggtttaccctggtggagccc
cgggccggggtgtttgagcaggccattgcccggcgggtagagcggcgcagcggcctgctg
gagagcctgacctag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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