KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c12560
Entry
OCA5_c12560       CDS       T01617                                 
Name
(GenBank) putative nucleoside deaminase
  KO
K11991  tRNA(adenine34) deaminase [EC:3.5.4.33]
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocg03016]
    OCA5_c12560
Enzymes [BR:ocg01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.33  tRNA(adenine34) deaminase
     OCA5_c12560
Transfer RNA biogenesis [BR:ocg03016]
 Prokaryotic type
  tRNA modification factors
   Deaminases
    OCA5_c12560
SSDB
Motif
Pfam: dCMP_cyt_deam_1 MafB19-deam SNAD4 NAD1 APOBEC4_like
Other DBs
NCBI-ProteinID: AEI05972
UniProt: F8BVW1
Position
complement(1342488..1343168)
AA seq 226 aa
MLKVSKHSDIDLMRRCIALARSSLAAGEYPFAAVIACDGVFVCESINRARQDQDVNRHAE
VVAISLAQQIRGINLADCTLYSAVEPCAQCSYAIREAQIGRVIYGLKSPLMGGHSRWDIL
SDAKLSTVLPEVFLPAPEVVSGFLHEEVEALFREWSPLIWSIIKARGVFVSDTEERVQLP
HRRGFVATLFRRFRMYIIDRIRQRRGAPASTSHQPAAAIDLDTHQR
NT seq 681 nt   +upstreamnt  +downstreamnt
atgcttaaagtcagcaagcattccgatattgatttaatgaggcgctgcattgcattagcc
agatcgtccctcgctgcgggtgaatatccgtttgcagccgtcatcgcctgcgatggcgta
ttcgtatgcgaatcgatcaacagggcaaggcaggatcaggacgttaatcgtcacgcagaa
gtcgtcgcgatttcgttggcgcaacagattcgaggaataaatttggctgattgcaccctc
tattcagcggtcgagccatgcgcccaatgctcatacgcaattcgcgaagcccagatagga
cgggttatctatggtttaaagtcaccattgatgggcgggcattcccgatgggacattctg
tcggatgccaagctgtcaaccgtacttcccgaggtcttcctgccggctcctgaggttgtg
tccggatttctacacgaggaagtcgaagccctctttcgcgagtggagccctttaatttgg
tccattatcaaggcacgcggcgtgttcgtcagtgacacagaagaacgcgttcagcttccg
catcggcgcggatttgtggccaccctgttcagacgcttcagaatgtacattatcgatcgt
atcaggcagcggcgcggcgcgcctgcatcaacatcccatcagcccgcagccgctatcgat
cttgacacacatcaacggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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