KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c22110
Entry
OCA5_c22110       CDS       T01617                                 
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00970  Aminoacyl-tRNA biosynthesis
ocg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    OCA5_c22110 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ocg03029]
    OCA5_c22110 (gatB)
Enzymes [BR:ocg01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     OCA5_c22110 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     OCA5_c22110 (gatB)
Mitochondrial biogenesis [BR:ocg03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    OCA5_c22110 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey
Other DBs
NCBI-ProteinID: AEI06913
UniProt: B6JFW6
Position
complement(2399098..2400582)
AA seq 494 aa
MNVIVDPKKLIKGATGDWEVVIGLEIHAQVTSNAKLFSGAATAFGGAPNEHVSLVDAAMP
GMLPVINAECVAQAIRTGLGLKAQINLKSTFDRKNYFYPDLPQGYQISQYKQPIVGEGVV
IVDIGDGESIEVGIERLHLEQDAGKSLHDQHPTMSFVDLNRSGVALMEIVSKPDMRSADE
AKAYVTKLRTILRYLGTCDGDMEKGNLRADVNVSVRHPGEPFGTRCEIKNVNSIRFIGQA
IDYEARRQIGILEDGGTIDQETRLYDPNKGETRSMRSKEEAHDYRYFPDPDLLPLEFTAG
YVEELKAKLPELPDEKRARFIADFGLTPYDAGVLVSERESADFYEAVLAKLADGTRDGKQ
AANWVINELFGRLNKEGVAIDASPVSADQLAAIVDLIGEGTISGKIGKDLFEIVWTKGGD
PKALVESLGLKQVTDLGAIEKMVDDIVAANPDKVAQARAKPQLIGWFVGQVMKLSGGKVN
PQAVNDLLKSKLGI
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaacgtaatcgtcgatcccaaaaagctcatcaagggcgccaccggcgactgggaagtc
gtcattggcctcgaaatccacgcccaggtcacctcgaacgccaagctgttctcgggtgcc
gcgaccgcattcggcggcgcgcccaacgagcacgtctcgctggtggacgcggcgatgccc
ggcatgctgccggtgatcaacgcggagtgcgtcgcgcaggcgattcgcaccgggctcggc
ctcaaggcgcagatcaacctaaagtcgaccttcgatcggaagaactatttctatccggat
ctgccgcagggctatcagatcagccagtacaagcagccgatcgtgggcgagggcgtcgtc
atcgtcgatatcggcgacggcgagagcatcgaggtcggcatcgagcggctgcatctcgag
caggatgccggcaagtcgctgcacgaccagcacccgaccatgtcgttcgtggacctgaac
cgctccggcgtcgcgctgatggagatcgtctccaagccggacatgcgctccgccgatgaa
gccaaggcctacgtcaccaagctgcggaccatcctgcgctatctcggcacctgcgacggc
gacatggagaagggtaacctgcgcgcggacgtcaacgtctcggtgcgccaccccggcgag
ccgttcggcacccgctgcgagatcaagaacgtcaactcgatccgcttcatcggtcaggcg
atcgactacgaggcgcgccgccagatcggtattctcgaagatggcggcaccatcgatcag
gaaacccgcctctacgaccctaacaagggcgagacgcgctcgatgcgctccaaggaagag
gcgcatgattaccgctacttccccgatcccgacctgttgccgctggaattcaccgcaggc
tacgtcgaggaactgaaagcgaagctgccggagctgccggacgagaagcgcgcgcgcttc
atcgctgatttcggcctcacgccttacgacgcgggcgttctcgtctccgagcgcgagagc
gccgacttctacgaagcggtgctggcgaagcttgcggacggcacgcgcgacggcaagcag
gccgccaactgggtgattaacgaactgttcgggcgcctcaacaaggaaggcgtcgccatc
gacgcgtcgccggtgtcggcggatcagctggccgcgatcgtcgatctgatcggtgaggga
acgatttccggcaagatcggcaaggatctgttcgagatcgtctggaccaagggcggcgat
ccgaaggcgctggtggaaagccttgggctgaagcaggtcaccgatctcggcgcgatcgag
aagatggtcgacgatatcgtcgccgccaatcccgacaaggtggcgcaggcgcgcgccaag
ccgcaactgatcggctggttcgttggtcaggtgatgaaattgtcgggcggcaaggtcaat
ccgcaggcggtgaacgacctgctcaagtccaaacttggcatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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