KEGG   Afipia carboxidovorans OM4: OCA4_c08160
Entry
OCA4_c08160       CDS       T01967                                 
Symbol
ruvB
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:oco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OCA4_c08160 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oco03400]
    OCA4_c08160 (ruvB)
Enzymes [BR:oco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OCA4_c08160 (ruvB)
DNA repair and recombination proteins [BR:oco03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OCA4_c08160 (ruvB)
    RecFOR pathway proteins
     OCA4_c08160 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_22 AAA_3 nSTAND3 AAA_2 AAA_18 Rad17 AAA_14 AAA_17 NTPase_1 AAA_33 NB-ARC AAA_24 TsaE RNA_helicase AAA_28 NACHT AAA_7 ABC_tran Sigma54_activ_2 IstB_IS21
Other DBs
NCBI-ProteinID: AEI01963
Position
866524..867564
AA seq 346 aa
MTDSRLVTSERRADDIGDASLRPQNLSEFVGQAQARANLSVFIEAARKRNEALDHVLFVG
PPGLGKTTLAQIVSRELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAV
EEVLYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVGATTRAGLLTNPLRDRFGIPLRLN
FYTEDELEKIVTRGARVLGVGMTADGANEIARRARGTPRIAGRLLRRVRDFASALDAEAI
DRKVADHALGALEVDKAGLDAMDRRYLSTIALNYGGGPVGVETLAAALSEPRDAIEDIIE
PYLIQCGYLQRTPRGRLLTSHAFKHLGLAEPSRDPGQFGLFAGDDE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaccgactcccgcctcgtcacgtccgagcgccgcgccgatgacatcggcgatgcgtcg
ctgcggccgcagaacctctcggagttcgtcggccaggcgcaggcgcgcgccaacctctcg
gtgttcatcgaggctgcgcgcaagcgcaatgaagcactcgatcatgtgctgttcgtaggt
cccccgggcctcggcaagacaacgcttgcgcagatcgtctcgcgcgaactcggcgtcggc
ttccgtgccacctcgggcccggtgattgcgaaggcgggcgaccttgcggcgctgctcacc
aatctcgaagagcgcgacgtgttgttcatcgacgaaatccatcgtctctcgccggcagtg
gaagaagtgctctatcccgcgatggaggatttccagctcgatctcatcatcggcgaggga
ccggcggcgcgttcggtgaaaatcgatctggcgaagttcacgctggttggcgcgacgacg
cgcgcgggcttgctcaccaatccgctgcgcgatcgcttcggcattccgctgcggctcaat
ttctacaccgaggatgaactggagaagatcgtcacccgcggcgcgcgcgtgctcggcgtc
ggcatgacagcggatggtgccaacgaaatcgcccgccgtgcccgcggtacgccgcgcatc
gccgggcggcttttgcggcgagtgcgcgacttcgcctccgcgctcgacgccgaagcgatc
gatcgcaaggtcgccgatcacgcgctcggtgcgctcgaggtcgataaagcggggctggat
gcgatggatcgccgctatctctcgaccatcgcgctcaactatggcggcggaccggtcggc
gtcgagacgctggcggcagcgctctccgagccgcgcgacgccatcgaggacatcatcgag
ccgtatctgatccagtgcggctacctgcagcgtacgccgcgcgggcggcttctcacctcg
catgcgttcaagcatctcgggctggcggagccctcgcgtgatcccgggcagttcggcctg
tttgcgggagacgacgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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