KEGG T01967: OCA4

Afipia carboxidovorans OM4: OCA4_c25510

Entry

OCA4_c25510       CDS       T01967

Symbol

recA

Name

(GenBank) recombinase A

K03553

recombination protein RecA

Organism

oco Afipia carboxidovorans OM4

Pathway

oco03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:oco00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OCA4_c25510 (recA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oco03400]
    OCA4_c25510 (recA)
DNA repair and recombination proteins [BR:oco03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OCA4_c25510 (recA)
    RecFOR pathway proteins
     OCA4_c25510 (recA)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    OCA4_c25510 (recA)

SSDB

Motif

Pfam:

RecA RecA_C Rad51 ATPase ATPase_2 AAA_16 AAA_24 AAA_25 CobU AAA nSTAND3 AAA_22 ABC_tran AAA_35 CLP1_P HPPK AAA_14

Other DBs

NCBI-ProteinID:

AEI03670

Position

complement(2714377..2715459)

AA seq 360 aa
MAPAALRIVEGTSMDKTKALTAALSQIERQFGKGSVMRLGKNDRSMDIEVISSGSLGLDI
ALGVGGLPKGRIVEIYGPESSGKTTLALHAVAEAQKKGGTCAFIDAEHALDPVYARKLGV
NVDDLLISQPDHGEQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQAR
LMSQALRKLTASINKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRTG
AIKERDEVIGNSTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA
WFSYDSQRLGQGRENAKSFLRDNPDMVAKIEAAIRQNSGLIAEQILAGPKESEDGEEAED

NT seq 1083 nt +upstreamnt +downstreamnt
atggccccagccgccctgcgtatcgttgaaggaacgtcgatggacaagaccaaggccctg
acggccgcgctgtcgcaaatcgagcgccagttcggcaaaggctccgtgatgcggctcggc
aagaacgaccgctcgatggatatcgaggtgatatcctccggctccctcgggctcgacatt
gcactcggcgtcggcggcctgccgaagggacgcatcgtcgagatttacggccccgaatcc
tccggcaagaccacgctcgcgctgcacgcggtggccgaagcgcaaaagaaaggcggcacc
tgcgccttcatcgacgccgagcacgcgctggacccggtctatgcccgcaagcttggcgtc
aatgtcgatgacctcctgatttcccagcccgaccatggcgagcaggcgctcgagatcgct
gatacgctggtgcgctccggcgcggtggacgtgctgatcgtcgattcggttgctgccctg
gtgccgcgcgccgaactcgaaggcgagatgggcgattcgctgccgggcctgcaggcgcgc
ctgatgagccaggcgctgcgcaagctcaccgcctcgatcaacaaatcgaacaccatggtg
atcttcatcaaccagatccgcatgaagatcggtgtgatgtatggctcgcccgaaaccacg
accggcggcaacgccctaaaattctatgcctccgtccgcctcgatatccgccgcaccggc
gcgatcaaggagcgcgatgaggtgatcggcaactccacccgcgtcaaggtggtgaagaac
aagctcgcgccgcctttcaagcaggtcgagttcgacatcatgtacggcgagggcgtctcc
aagatgggcgagatccttgacctcggcgtcaaggccggcatcgtcgagaagtccggcgcc
tggttctcctatgacagccagcgcctcggccagggccgtgagaacgcaaagtccttcctg
cgcgacaatccggacatggtggcgaagattgaggccgcaatccggcagaactccggtctg
atcgccgagcagattcttgccggtccgaaggagagcgaggacggcgaagaggcggaggac
tga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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