KEGG   Oryctolagus cuniculus (rabbit): 100337807
Entry
100337807         CDS       T03373                                 
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
  KO
K08736  DNA mismatch repair protein MSH3
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu01524  Platinum drug resistance
ocu03430  Mismatch repair
ocu05200  Pathways in cancer
ocu05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100337807
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100337807
  09162 Cancer: specific types
   05210 Colorectal cancer
    100337807
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    100337807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100337807
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     100337807
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-GeneID: 100337807
NCBI-ProteinID: XP_051710024
Ensembl: ENSOCUG00000016921
Position
11:complement(88100757..88275978)
AA seq 1116 aa
MPRGKRASGGLAASGPAPARQAVLSRFFQAKESRKPTPPATDAAEKASPASAAPPASTSP
PRRPPRAGSLEQAAEASSKKRSQEPEGPVSKKARPVGEQEGGSGSEPKQCLSSGLVLKSL
EKLRKFCCDSAPPQTRVQTERLRGGCAVLPKCTDYDDLDLLRARNAAASEDSGSQARQKD
KTFSDLSSFGSSQASHEDGQQACESKPLNKRSKSVYTPLELQFLEVKRQHQDAVLCVECG
YKYRFFGEDAEIAARELNIYCHLDHNFLTASIPTHRLFVHVRRLVAKGYKVGVVKQTETA
ALKAVGDNKSSLFSRKLTALYTKSTLIGEDVNPLIKLDGAMNVDEIMTDASSNYLLCICE
NKEKAKDKKKGSIFIGVVGVQPATGEVVYDSFQDSASRSELETRISALQPVELLLPSHLS
EQTERLIHRATAVSVRDDRMRVERMEDVHFEYSHAFQMVTEFYAKDETQGSQSLSGILNL
EKPVVCSLAAVIRYLKEFNLEKMLSKPENFKQLSSEVEFMTINGTTLRNLEILQNQTDMK
TKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAVSEVLHSESSVFGQIENHL
NKLPDIERGLCSIYHKKCSTQEFFLIVKTLCHLKSEFQALVPAVNSQVHSDLLRTCALDI
PELLRPAERYLQVLNEQAAKIGDKTELFKDLSDFPLIKKRKNEIQEVTEKIQVHLQEIRK
ILKNPSAQYVTVSGQEFMIEIKNSSLSCIPADWIKVGSTKAVSRFHSPFIVENYRRLNQL
REQLALDCGAEWLGFLETFSGHHDSLCKAVHHLATVDCIFSLTKVAKQGNYCRPALQEER
KIIIKNGRHPVIDVLLGEQDQYVPNSTNLSGDAERVMIITGPNMGGKSSYIKQVALIAVM
AQIGSYVPAEEATLGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRQATPQSLVILD
ELGRGTSTHDGIAIAYATLEYFIRDVQSLTLFVTHYPPVCELEKHYSQQVGNYHMGFLVT
EDESKQDPGGEEPVPDFVTFLYQITQGVAARSYGLNVAKLADVPGEVLRKAARKSQELEG
LVNAKRKRLKYFTKVWTIHSAEDLRNWTAECEEEGL
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgcctcgcgggaagcgcgcctcaggcggccttgccgcttccggccctgcgccggcccgg
caagcggtgctgagccgattctttcaggctaaggagagccggaagcccacgccgcccgcc
actgacgcagccgaaaaggcgagccccgcctccgcagcgcccccggcgtccacgtccccg
cctcggcggccgccgcgcgcgggcagtttggagcaggccgcggaagcttccagcaaaaag
agatctcaggagcccgaggggcctgtgagcaagaaagcgcggcctgtgggggaacaggaa
ggaggaagtggctccgagccgaagcagtgcctgagttcggggctcgttttgaagtctctg
gagaaactcaggaaattctgctgcgattccgcgccgcctcagactcgagtccagacagaa
cgccttcggggggggtgtgcggtcctgccgaagtgcaccgattatgatgacctcgatctc
ctgcgtgccaggaatgccgccgcttctgaggattccggctctcaggcccgtcagaaggac
aagacattttctgatctcagttcttttggatcatcacaagcgagccacgaagatggacag
caagcgtgtgagtctaagcccctgaacaagcggtccaagagcgtctacaccccgctggag
ctgcagttcctggaggtgaagcggcagcaccaggacgcggttctgtgcgtggagtgcggc
tataagtacaggttcttcggggaggatgcagagattgcagctcgggagctcaacatttat
tgccacttggatcacaacttcctgacagccagcatccctacccacaggctgtttgtccac
gtgcgccgtctcgtggccaaaggatacaaggtgggagttgtgaagcagactgaaactgca
gcactaaaggccgttggggacaacaaaagctcactgttttcccgaaaactgactgctctt
tataccaaatccacactcattggagaagatgtgaatcctctaatcaaactggatggtgct
atgaatgtcgatgagataatgactgatgcttcttccaactatcttctgtgtatctgtgaa
aataaagaaaaggctaaggacaagaagaaaggaagcattttcattggcgttgtgggagtg
cagcctgccaccggcgaggtcgtgtacgacagcttccaggactccgcttcccgttcagag
ctggagacgcggatctcagccctgcagccagtggagctgctgctgccctcacacctgtct
gagcaaaccgagaggctcattcacagagctacagcggtcagtgtgcgggatgacagaatg
cgcgtggaaaggatggaggatgttcactttgagtacagccacgcgttccagatggttacc
gagttttatgcaaaggatgaaacccaaggctctcaaagtctttctggcatccttaacctg
gagaagcctgtggtctgctctttggctgctgtaataagatacctcaaagaatttaacttg
gaaaagatgctttccaaacccgagaattttaaacagctgtcaagtgaagtggaatttatg
acaattaatgggacgacgttaaggaatttggaaatcctgcagaatcagactgatatgaaa
acgaaagggagcttattctgggtcttagaccacacgaaaacttcatttggaagacggaag
ttaaagaagtgggtgacccagccactccttaaattgagggacataaatgcccgactggat
gctgtatctgaagttctccattcagaatctagtgtgtttggtcagatagaaaatcatcta
aataaactgcctgacatcgagagaggactctgtagcatttatcacaaaaaatgttctacc
caagagttcttcttgattgtcaaaactctgtgtcacctgaagtcagaatttcaagcgtta
gtacctgctgtgaattcccaagttcactcagacctgctgcggacgtgcgctttggacatt
ccagagctgctcaggccagcggagcgttacttgcaggtccttaatgaacaagccgccaaa
attggggacaaaactgaattattcaaagacctttctgacttccccttaataaaaaagagg
aagaatgaaattcaagaagtcacagaaaagatccaagtacatttacaagaaatccgaaaa
atattaaaaaatccttccgcacagtatgtgacagtatcgggacaggagtttatgattgag
ataaagaattcttctctatcttgtataccagctgattggattaaggttggaagcacaaaa
gctgtgagccgctttcactctccttttattgtagaaaattacagacgactgaatcagctc
cgagagcagctcgcccttgactgcggtgctgagtggcttggttttctagagacgttcagt
ggacatcatgactccctgtgtaaggcggtgcatcacctagcaactgttgactgcattttc
tccctgaccaaggtcgctaagcaaggaaattactgcagaccagctctacaagaagaaagg
aaaatcataataaaaaatggaaggcatcctgtgattgatgtgttgctcggcgagcaggat
cagtacgttcccaatagtacgaatctgtcaggggacgcagagagagtgatgatcatcact
ggtccaaacatgggcggaaagagctcctacatcaaacaggttgcactgatcgccgtcatg
gctcagatcggctcctacgttcctgccgaggaagccacgcttgggatcgtggatggcatt
ttcacgagaatgggtgctgcagacaacatatataaaggacggagcacatttatggaagaa
ctgacagacacagcggaaattatccgccaagcaacaccgcagtccttggtcatcctggat
gagctgggaagagggaccagcactcacgatggaatcgccattgcttatgctactctggag
tattttattagagatgtgcagtctctaaccctgtttgtcacccattatccaccagtttgt
gaactggagaaacattactcacagcaggtgggcaattaccacatgggcttcttggtgacc
gaagatgaaagcaaacaggacccaggtggagaggaaccagtccctgattttgtcacgttt
ctttaccaaatcacccaaggcgttgccgccaggagttacgggctgaatgtggccaagctg
gcagacgttcctggcgaggtcttacggaaagcagcccgcaagtcacaggagctggaaggg
ctggtgaacgcgaaaaggaaaaggctaaagtattttacaaaagtatggacaatacacagt
gcagaagatctgcgaaactggacagccgagtgcgaagaggaaggactatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (5)   
   Pfam (5)   
All databases (61)   

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