KEGG   Oryctolagus cuniculus (rabbit): 100339550
Entry
100339550         CDS       T03373                                 
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X5
  KO
K14437  chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100339550
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100339550
SSDB
Motif
Pfam: SNF2-rel_dom BRK Chromo Helicase_C ResIII DEAD CHDCT2 HDA2-3 Myb_DNA-bind_7 MUN DUF4812
Other DBs
NCBI-GeneID: 100339550
NCBI-ProteinID: XP_017196812
Ensembl: ENSOCUG00000010034
Position
3:76123274..76324309
AA seq 2427 aa
MTQVSGPNAQLAKSDDYLPSIEQQPQQKKKKKKNNHIVAEDPSKSFGKDDFPGGVNQELN
RNSLDGSQEEKKKKKRPKVKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTAAP
KPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRS
SRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQSEQQESVDAEGPVVEKIMSSRS
VKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLS
EIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIE
EFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCI
LADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQ
ASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRL
KNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLK
TEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS
KGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAG
KLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAID
RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK
IYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELMEFSDLESDSEEKPCAK
PRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTILVYC
LNHYRGDENIKSFIWDLITPTADGQTRALVNHSGLSAPVPRGRKGKKVKAQSSQPVVQDA
DWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQEVIGDQADKILEGADSSEAD
VWIPEPFHAEVPTDWWDKEADKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIA
AEQRGTDMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSPPDDKDESMEIHATGK
HSESNAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRA
LEAEREAIISEKRQKWTRREEADFYRVVSTFGVIFDPVKQQFDWNQFRAFARLDKKSDES
LEKYFSCFVAMCRRVCRMPAKPDDEPPDLSSLIEPITEERASRTLYRIELLRKIREQVLH
HPQLRERLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVSRTDYHILNDPELSFLDAHKN
FAQNRGAGNISSLNPLAVGFGQTPPVISSAHIQDEKVAEQAEGRAEEPESSAAKEKPDVK
EEEEEADSGGKDSKQECEAEASSVKSELKGGEGSADPGSKSVSEKGSEEDEEEKLEDDDK
SEESSQPEAGAVSRGKNFDEESNASMSTARDETRDGFYIEDGDPSVAQLLHERTFAFSFW
PKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLIPGYTPASVDSPLQRRSFAELSVVG
QASISGSEDITTSPQLSKEDALNLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRES
QVVSENGQEKVVDLSKASREATSSTSNFSSLTSKFILPNVSTPVSDAFKTQMELLQAGLS
RTPTRHLLNGSLVDGEPPMKRRRGRRKNVEGLDLLFMSHKRTSLSAEDAEVTKAFEEDLE
TPPIRNIPSPGQLDPDTRIPVINLEDGSRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVP
KNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLP
RWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGEGASRRGRRPKSEIARAAA
AAAAVASTSGISPLLVNSLFAGMDLTSLQNLQSLQSLQLAGLMGFPPGLATAATAGGDAK
NPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAATGNTTTASSQGEPEDGTSKVEEKGNEN
EDENKDSEKSTDAVPATDSANGSVGAAAAPAGLPSNPLAFNPFLLSTMAPGLFYPSMFLP
PGLGGLTLPGFPALAGLQNAVGSGEEKAADKAEGGPFKDGENLEGSDAEESLDKTAESST
LEDEAAQGEELDSLDGGDEIEDSENHE
NT seq 7284 nt   +upstreamnt  +downstreamnt
atgactcaggttagtggaccgaatgctcagctagcgaagagcgatgattacctgccgtcg
atagagcagcaaccgcagcagaagaagaagaagaagaaaaacaaccacatcgttgcagag
gaccccagtaaaagttttggtaaagatgacttccctggtggggttaaccaagaactaaat
aggaactcactagatgggtcccaagaagaaaaaaagaaaaagaaaaggccgaaggtgaaa
aaagacccgaaggaaccgaaagaacccaaggagaaaaaagagcccaaggaacccaagacc
ccaaaagcccctaagattcccaaagagccaaaggaaaagaaagcaaaaactgccgcgcca
aaacccaaatccagcaaaaagtcaagtaataagaaacctgattcagaagcaagtgctttg
aagaaaaaggtcaacaagggaaaaacagaaggttctgaaaattcagacttagacaaaacg
cccccaccatctcctcctcctgaagaagatgaggacccaggtgttcagaagagacggtcc
agtaggcaggtgaagagaaagcgctacactgaagacttggagttcaagatttctgatgag
gaggcagatgatgcagatgctgctgggagagactccccttccaacacttcacagtcagag
cagcaggaatctgttgatgcagaaggcccagtggtagaaaaaatcatgagcagtcgttca
gtcaaaaagcagaaggaatctggagaggaggtagaagttgaagaattctatgtgaaatac
aaaaacttctcttatcttcattgtcagtgggcttctgtagaagatctggaaaaagataag
agaattcagcagaagattaaacgatttaaggcaaaacagggccagaataaattcctttca
gagattgaggatgagctttttaatccagattatgtggaggttgaccggataatggacttt
gcacgtagcacagatgaccggggagagcctgtgactcactatctggtgaagtggtgctca
cttccctatgaagacagcacatgggagctgaggcaggatatagatcaagcaaagatcgaa
gagtttgagaaactaatgtccagggaaccggaaacagagcgtgtggagcgacctcctgct
gatgattggaagaaatcggagagttccagggagtataaaaacaataacaaactcagggaa
taccagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatt
ttagcagatgaaatgggtttgggaaaaaccatccagtccattacatttctctatgagata
tatttgaaaggaatccatggcccttttttagtaattgccccattgtccacaatccccaac
tgggaaagggaattccgaacctggacggagttgaatgtggttgtgtatcatgggagtcaa
gctagtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtg
ataaaggggtcctataagtttcatgccatcatcacaacatttgagatgattttgactgat
tgtcctgagctgcggaatattccatggcgctgtgtggtcattgatgaagcccacaggctg
aagaataggaactgcaagctgctggaaggtctcaagatgatggacttggaacacaaagtg
ctgctgacgggaaccccgctgcagaacaccgtggaagagctcttcagcttgcttcatttc
ttggagccaagtcgctttccttcggaaaccacctttatgcaggaatttggtgatctaaag
acagaagagcaggtgcaaaaacttcaggctattctaaagccaatgatgttgagacgtctc
aaagaagatgtagaaaagaacttggcccccaaagaagaaactattattgaagttgagcta
acaaacattcagaagaaatattaccgagccatccttgagaagaatttcacatttctttcc
aaaggtggtggacaagctaacgtacctaaccttttaaacactatgatggaattacgaaag
tgctgcaatcacccgtaccttatcaatggtgctgaagagaaaattttggaagagtttaaa
gaaacacacaatgcagagtctccagattttcagctccaggcaatgatccaggctgctggc
aagcttgtgctgattgacaagctgctgccgaaactgaaggctggtggccacagggtgctt
atcttttcccagatggtgcgctgcttggacatactggaagactacctcattcaaagacgg
tacccgtatgaaaggattgatggccgagtaagaggcaacctccgccaggcagctattgac
agattctccaagccagattctgataggtttgttttcctcctgtgtacaagggcaggaggc
ttaggcattaatctcactgctgctgatacctgcatcatctttgattcagactggaatccc
caaaatgacctccaggctcaagctagatgtcatagaataggacagagcaaatctgtgaaa
atctacaggctgattacgagaaattcctatgaaagggaaatgttcgacaaggccagtttg
aagctgggtctggataaagctgtgctgcagtccatgagtggaagagagaacgccaccaac
ggggtacaacagctttccaagaaagagatcgaggatctcctccggaagggggcctacggt
gcgctcatggacgaggaggatgagggctccaagttctgtgaagaggatatcgatcagatt
ctcctgcggcgaacccacaccatcaccattgagtctgaaggaaaaggctccacgtttgct
aaggccagttttgttgcatctggaaataggacagatatttccttggatgatccaaatttc
tggcagaagtgggccaagaaggctgaattggatattgatgccttaaatgggaggaacaac
ctggttattgacactccaagagtgagaaaacagaccaggctgtacagcgcagtaaaggaa
gatgaactgatggagttttcagacttggaaagtgattccgaagaaaagccttgtgccaag
ccacgacggccccaggataagtcacagggctatgcgcggagcgagtgtttcagggtagag
aagaatctgcttgtttacggttggggacggtggacagatatcctttcccacggacgctac
aaacgtcagctcaccgagcaagatgtcgaaaccatctgcagaaccatcttggtgtactgt
cttaatcattacagaggggatgagaatatcaaaagcttcatctgggatctgatcacgccc
acggctgacggccagactcgagccttggtcaatcattccggtttgtcagccccggtgccg
aggggaaggaaggggaagaaggtgaaggcccagagctcgcagccggtggtgcaggatgcc
gactggctggccagctgcaacccagacgccctgttccaggaggacagctacaaaaagcac
ctgaagcaccactgtaacaaggtcctgctgcgtgtccgcatgctgtactacctacgacaa
gaagttataggagaccaggcagataagatcttagagggtgctgactcaagtgaagcagat
gtttggatccctgaacctttccatgcagaagttcctacagattggtgggataaggaggca
gataaatccctcttaattggagtgttcaaacatggctacgagaagtacaattctatgcgc
gctgaccccgcactgtgctttctggaacgagttggtatgccggatgccaaggccatagct
gccgagcagagaggaacagacatgctagcagatggcggtgacgggggagaatttgataga
gaagatgaagacccagaatataaaccaacgagaacgccattcaaagatgaaatagatgaa
tttgcaaattctcctccagatgataaggatgaatccatggaaatacacgccacaggcaag
cacagtgagagtaatgctgagttaggccaactttactggcctaacacttcaaccctgact
acacgtctgcgccggctcattactgcctatcagcgcagctataaaaggcaacaaatgagg
caagaggccctaatgaagactgaccggcgcagacggcggccccgggaggaagtgagagcg
ctggaggcggaaagggaagctattatatctgaaaaacggcaaaagtggacaagaagagaa
gaggctgatttttaccgcgtggtgtccacctttggggtcatttttgaccccgtgaaacag
cagtttgactggaaccaattccgagcctttgccagacttgacaaaaagtctgatgagagt
ttggagaagtacttcagttgttttgtggccatgtgtaggcgagtgtgtcgaatgcccgcg
aagccagatgatgagccgcctgacctctcctccctgatcgagccgatcacagaggagcga
gcctccagaactctgtaccgcatcgagctgctgcggaagatccgcgagcaggtcctgcac
cacccgcagctcagggagaggctgaagctctgccagccgagcttggacttgcccgagtgg
tgggagtgcgggaggcatgaccgagatctgctggtgggcgctgctaaacacggggtcagt
cggacggattatcacatcctcaatgaccccgagctgtccttcttggatgcacataaaaac
tttgctcagaatagaggggcaggtaatatatcttccttgaacccgctggcagttggattt
ggccaaaccccgcctgtcatctcatcggctcacattcaagatgaaaaggtcgcggaacaa
gctgagggcagagcagaggagcccgaaagctcggctgccaaggagaagcctgacgtgaaa
gaagaagaagaggaagccgacagcgggggcaaggacagcaagcaggagtgtgaggccgag
gccagctctgtgaaaagcgagctgaaagggggcgagggcagtgcagaccctgggtccaag
tctgtctcagagaaaggttccgaagaggacgaagaagaaaagctggaagatgatgataag
tcagaagagtcctcccagcctgaagcaggagctgtctctcgagggaagaattttgatgaa
gaaagcaatgcttccatgagcactgctagggatgaaacccgagatggattctacatagag
gacggagatccgtcagtagcccagctcctccatgaaagaacttttgccttctcattttgg
cctaaggatagagtaatgataaaccgattagataacatctgtgaagcagtgttgaaaggc
aaatggccagtaaatcggcgccagatgtttgatttccagggcctcatccctggctacaca
cccgcctccgtggacagtcccctgcagaggaggagctttgccgagctctccgtggtcggc
caagccagcatcagtgggagcgaggacatcactacttcccctcagttgtcaaaggaagat
gccctcaatctctctgtcccgcgccaacggaggagaagaaggagaaagattgaaattgag
gccgaaagagctgccaagaggcgaaatctcatggagatggttgcccagctgcgagagtct
caagtggtctcagaaaatggacaagaaaaagttgtagatttatcaaaggcctcaagagag
gcgacaagttctacctcaaatttttcatctcttacttcaaaatttatcttgcctaatgtc
tcaaccccagtgtctgatgcctttaagactcagatggaactgcttcaggcaggcctttcg
cgcacacccacaaggcatctgcttaatggctccctagtggatggagagcctcccatgaag
aggaggcggggaaggaggaaaaacgtggagggccttgatctgcttttcatgagccacaaa
cggacgtcattgagtgccgaggatgctgaggtgaccaaagcttttgaggaagatttagag
accccaccaataagaaacattccttctcccggacagctggacccagacactcggatccca
gttatcaatcttgaagatgggagtagactggtgggggaagatgctcctaaaaataaggat
ttagttgaatggctgaagctgcatcctacttacactgttgatatgccaagttatgtacca
aagaatgcagatgtgctgttttcctcgtttcagaaaccgaaacagaaacgacacagatgt
cgaaatcctaacaagttggatataaacactttgacaggagaagaaagggtgcctgttgtc
aataaacgaaatgggaagaagatgggtggagctatggcgcctccaatgaaggacctgccc
aggtggctggaagaaaatcctgaatttgcagttgctccggactggactgatatagttaaa
cagtctggttttgtccctgagtcgatgtttgaccgccttctcaccggacctgtggtgagg
ggagaaggagccagccggcgaggaagaaggcccaaaagtgaaatcgccagagccgccgcc
gccgccgccgccgtggcctccacgtcggggatcagccctctgctggtgaacagcctgttt
gctggaatggacctgacgagcctccagaacctacagtccctccagtcgctccagctggca
ggtctcatgggcttccctccaggactggcaacagctgccaccgccggaggcgacgcgaag
aaccctgctgccgtgctacccctgatgctgccgggaatggcaggcctgcccaacgtgttt
ggactgggcgggctgttgaataaccctctctcagctgctactggaaacaccactactgct
tctagtcaaggagaaccggaagacggcacttcaaaagtagaagagaaaggaaatgagaac
gaagacgagaacaaagactcggagaaaagcacagatgctgtcccagctactgactctgcg
aacggatctgttggtgctgctgctgccccggccggactgccctccaacccgctggccttc
aaccccttcctcctgtccaccatggccccaggcctcttctacccatccatgtttctacct
ccaggactggggggattgacactgcctgggttcccagcgctggcaggactgcagaatgcc
gtgggctctggcgaagaaaaggctgctgacaaggccgaggggggccccttcaaagacgga
gagaacctggaaggcagcgatgccgaggagagcctggacaagaccgcagagtcctccacc
ttagaggacgaggcggcgcagggcgaagagctagactcactggatgggggggacgaaatc
gaagacagcgagaaccatgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (11)   
   Pfam (11)   
All databases (73)   

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