KEGG   Oryctolagus cuniculus (rabbit): 100343517
Entry
100343517         CDS       T03373                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03410  Base excision repair
ocu03420  Nucleotide excision repair
ocu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100343517
   03410 Base excision repair
    100343517
   03420 Nucleotide excision repair
    100343517
   03430 Mismatch repair
    100343517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100343517
   03036 Chromosome and associated proteins [BR:ocu03036]
    100343517
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100343517
DNA replication proteins [BR:ocu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100343517
  DNA Replication Termination Factors
   ELG1-RFC complex
    100343517
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100343517
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100343517
  Check point factors
   HRAD17(Rad24)-RFC complex
    100343517
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Viral_helicase1 AAA_24 Mg_chelatase AAA_11 Rad17 RuvB_N AAA_18 AAA_19 AAA_assoc_2 nSTAND3 MipZ AAA_5 AAA_28 AAA_25 AAA_23 AAA_30 T2SSE NTPase_1 ABC_tran MeaB RNA_helicase SLFN-g3_helicase DUF815 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 100343517
NCBI-ProteinID: XP_008247305
Position
Unknown
AA seq 360 aa
MGRGLGAAGSGRESMEVQENGAVQDAAPVASKASSSAGHYELPWVEKYRPVKLNEIVGNE
DTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGID
VVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNAS
DKIIEPIQSRCAVLRYTKLTDAQILARLLNVIEKEQVPHTDDGLEAIIFTAQGDMRQALN
NLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPED
IIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggggcggggcctcggggcggcgggaagcggacgcgagagtatggaggtgcaggagaat
ggtgcggtccaggacgctgcgcctgtcgccagcaaggcgtccagcagcgccggccactac
gagctgccgtgggtggagaagtacaggccggtgaagctgaatgaaattgtggggaatgaa
gacacggtgagcaggctggaggtctttgcccgagaagggaacgtgcccaacatcataatt
gctggccccccgggaacgggcaaaacgaccagcatcctgtgtttggcccgagcgctgctg
ggcccggcccttaaggatgctgttctggaactcaatgcctcgaatgacaggggcattgac
gtcgtgaggaataaaatcaagatgttcgcccagcagaaggtcaccctccccaagggccgg
cacaagatcatcatcctggacgaggccgacagcatgacggacggggcccagcaggctttg
aggaggaccatggagatctactccaagacgactcgctttgctctggcatgcaacgcttcg
gacaaaatcatagagcccatccagtcgcggtgcgccgtcctgcgctacaccaagctcacg
gacgcacagattctcgccaggctgctgaacgtcatcgagaaggagcaggtgccacacacg
gacgacggcctggaggccatcatcttcacggcgcagggcgacatgcggcaggcgctgaac
aacctgcagtccaccttctcggggttcggtttcatcaacagcgagaacgtgttcaaggtc
tgcgacgagccccaccccctgctggtcaaggagatgatccagcactgtgtgaatgccaac
atcgacgaagcctacaagattctcgcgcacctgtggcacctgggctactccccagaagac
atcattggcaacattttccgggtgtgtaaaaccttccagatggcggagtacttgaagctg
gagtttatcaaggaaatcggatacacgcacatgaaagtcgcagaaggcgtgaactctctg
ctgcagatggcggggctgctggccaggctgtgccagaagacaatggccccggtggccagt
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (30)   
   Pfam (30)   
All databases (59)   

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