KEGG   Oryctolagus cuniculus (rabbit): 100343838
Entry
100343838         CDS       T03373                                 
Name
(RefSeq) RNA-binding protein FXR2
  KO
K15516  fragile X mental retardation protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100343838
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100343838
   Factors involved in mRNA localization
    Other mRNA localization factors
     100343838
   mRNA cycle factors
    Stress granule specific factors
     100343838
SSDB
Motif
Pfam: FXMRP1_C_core FXR_C1 Tudor_FRX1 KH_9 KH_1 Agenet NdhS NfeD
Other DBs
NCBI-GeneID: 100343838
NCBI-ProteinID: XP_051681198
Ensembl: ENSOCUG00000010393
Position
19:9192471..9211037
AA seq 673 aa
MGGLASGGDVEPGLPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLP
PPADYNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLE
RLRPVNPNPLATKGSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNITNSELFI
LSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEEATKHLETSKQLAAAFQEEFTVREDLM
GLAIGTHGANIQQARKVPGVTAIELGEETCTFRIYGETPEACRQARSYLEFSEDSVQVPR
NLVGKVIGKNGKVIQEIVDKSGVVRVRVEGDNDKKNPREEGMVPFIFVGTRENISNAQAL
LEYHLSYLQEVEQLRLERLQIDEQLRQIGLGFRPPGSGRGSGSSDKAGYTTDESSSSSLH
TTRTYGGSYGGRGRGRRTGGPAYGPSSDPSTASETESEKREEPSRAGPGDRDPPTRAEES
RRRPVGGRGRGPPPAPRPTSRYSSSSISSVLKDPDSNPYSLLDTSEPEPPVDSEPGEPPP
ASARRRRSRRRRTDEDRTVMDGGLESDGPNMTENGLEDESRPQRRNRSRRRRNRGNRTDG
SISGDRQPVTVADYISRAESQSRQRPPLERTKPSEDSVSGQKGDSVSKLPKGPSENGELS
APLELGSLVNGVS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgggcggcctggcctctgggggggatgtggagccgggactgccggtcgaggtgcgcggc
tccaacggggccttctacaagggctttgtgaaggatgtccatgaagattctgttaccatc
ttctttgaaaacaactggcagagtgagagacagattccttttggggatgtccggctacca
cctcctgcagactataataaggagatcacagaaggggacgaggtggaggtttattctcga
gccaatgaacaggagccatgtggctggtggctggcccgtgtgcggatgatgaagggagat
ttctatgtcattgagtatgccgcttgcgatgccacctacaatgagattgttaccctggag
cgacttcggccagttaatcccaatccccttgcaaccaaaggcagcttcttcaaggttacc
atggctgtgcctgaggatctgagagaggcctgctctaacgaaaacgtccataaagagttc
aagaaagcgcttggagccaactgcatctttctcaacatcacaaacagtgagctcttcatt
ctgtcaaccacggaagcccctgtgaagcgggcgtctctgctgggtgatatgcattttcga
agcctgcgcaccaaactactactcatgtcccgcaatgaagaagctaccaagcacctagag
acaagcaagcagctggcagcagcattccaggaagagtttacagtgcgagaggacctgatg
ggactggcaattgggactcatggggccaatatccagcaggcccgaaaagtacctggagtg
accgccattgagttgggtgaagaaacctgcactttccgcatctatggggagacgccagag
gcatgccgacaggctcggagctacctggagttttctgaagattcagtgcaagtgcccagg
aacctggttggcaaagtgatcggaaagaatgggaaagtgatccaggagatcgtggataag
tctggtgtggtgagggtgcgagtggaaggtgacaatgacaagaagaaccccagggaggag
gggatggttcccttcatatttgttggcactcgagaaaatatcagcaatgcccaggccctg
ctggagtatcacctctcctacctgcaggaggtggagcagcttcgcttggagaggctgcaa
attgacgaacagctgcggcagattgggctgggctttcgtcctcctgggagcgggcgtggc
agtgggagcagtgacaaggctggctataccactgacgagagctcctcctcttccctccac
acgactcgaacctacgggggcagctatgggggccggggtcggggccggaggacaggcggt
cctgcctatggccccagctcagacccgtccacagcttcggagacggagtcagagaagaga
gaggagcccagccgagctgggcctggtgaccgggatcccccaacgcgggcagaggagagc
cggaggcggcccgttggaggccggggtaggggacctcctcctgccccccggcccacctcg
agatacagctcttcatctattagctcagtgctgaaggatccagacagtaacccctacagc
ctgctggacacatctgaaccagagcccccagttgattcagagcccggggagcctccccca
gcaagtgccaggcgccgccgctcccgtcgccgccgcactgacgaagacaggactgtcatg
gatggaggcctggagtctgatgggcccaacatgacagagaatggcctggaagatgaatca
agaccccagcggcgtaatcgcagccgccgtcgccgtaaccgtggtaaccggactgatggt
tctatcagtggagaccgtcagccagtgactgtggctgactatatctcacgagcagagtct
cagagccgccagcggccacccctggaacgcactaaaccctcagaggactctgtttcggga
cagaagggtgactctgtcagcaagcttcctaagggcccctcggagaatggggagctctct
gcccccctggagttgggtagtttggtgaatggggtttcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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