KEGG   Oryctolagus cuniculus (rabbit): 100349970
Entry
100349970         CDS       T03373                                 
Name
(RefSeq) cysteine protease ATG4D
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04136  Autophagy - other
ocu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100349970
   04136 Autophagy - other
    100349970
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ocu01002]
    100349970
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100349970
   03029 Mitochondrial biogenesis [BR:ocu03029]
    100349970
Peptidases and inhibitors [BR:ocu01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   100349970
Membrane trafficking [BR:ocu04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    100349970
Mitochondrial biogenesis [BR:ocu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100349970
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 100349970
NCBI-ProteinID: XP_008249765
Ensembl: ENSOCUG00000014176
Position
Unknown
AA seq 522 aa
MAAAARAGPGSMGGVGRVARPADTACWPRGAPGARRPQPLPGPSGRPPGAPMNSVSPAAA
QYRSGSPEHARRPEARRPRGPRAPDPNGLGPPGAGGPARASPGAAAGEPDEVDKFKAKFL
TAWNNVKYGWAVKSRTSFSKISSVHVCGRRYRFEGEGDIQRFQRDFVSRLWLTYRRDFPP
LAGGCLTSDCGWGCMLRSGQMMLAQSLLLHFLPRDWTWAEGLGSAEPAGSASPSRYRGPA
RWMPPRWAQGAPELEQERRHRQIVSWFADHPGAPFGLHRLVELGQSSGKKAGDWYGPSLV
AHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVVILVPVRLGGET
LNPVYVPCVKELLRLELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQPTVDVSQTDFP
LESFHCTSPRKMAFAKMDPSCTVGFYAGGRKEFETLCSELTRVLGSSSATERYPMFTLAE
GHAQDHSVDDLCSQPSSPPAPPLPRAGRLKAKRPSAEDFVFL
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcggcggcggcgcgcgccggccccgggagcatggggggcgtgggccgagtagcgcgc
cccgccgacaccgcgtgctggccgcggggcgcccccggggcgcggcggccgcagcccctg
cccgggccgtcgggccgccctcccggcgcgcccatgaactccgtgtcgccggccgccgcg
cagtaccggagcgggagcccggagcacgcgcgccggcctgaggcccgcaggccgcgggga
ccccgagccccagaccccaacggcctgggaccccccggagccggcggccccgcccgtgcc
tctccgggggccgctgcaggggagccggacgaagtggacaagtttaaggccaagttcctc
acggcctggaacaacgtcaagtacggttgggctgtcaaaagccggaccagctttagcaag
atctccagtgtccatgtgtgcggccggcgctaccgtttcgagggcgagggtgacattcaa
cgcttccagcgggactttgtgtcccgcctgtggctcacctaccgccgagatttcccgccc
ctggcggggggctgcctcacttcagactgcggctgggggtgcatgttacggagtggccag
atgatgctggcccagagcctgctgctgcacttcctgcccagggactggacgtgggccgag
ggcctgggctctgctgaaccggcggggtcggcctctcccagccggtaccgggggcctgcc
cgctggatgcccccacgctgggcccagggcgccccagagctggagcaggaacgccggcac
cggcagatcgtgtcctggttcgccgaccaccccggggcccccttcggcctgcaccgcctg
gtggagctggggcagagctcaggcaagaaggcgggagactggtacgggccatcgctggtg
gcacacatcctcaggaaggccgtggagagctgctcggaggtcacgcgcctggtggtgtac
gtgtctcaggactgcacagtgtacaaggccgacgtggctcgcctggtggccaggccggac
cccacagccgagtggaagtctgtggtcatcctggtgcccgtgcggctgggtggcgagacg
ctcaaccctgtgtacgtgccctgcgtgaaggagctcctgcgcctggagctgtgcctgggc
atcatggggggcaagccgcgccactcactgtacttcatcggctaccaggacgacttcctg
ctctacctggacccccactactgccagcccactgtggacgtcagccagactgacttcccc
ctggagtctttccattgcacctcacctcgcaagatggccttcgccaagatggacccgagc
tgtaccgtgggcttctacgctggaggcaggaaggagtttgagaccctctgctcagagctg
accagggtcctcggctcctcctccgccaccgagcgctaccccatgttcaccctggccgag
ggccacgctcaggaccacagcgtggacgacctgtgctcgcagccgtcctccccgccggcg
ccgccgctcccgcgcgccgggcgcctcaaggccaaacgccccagcgccgaggacttcgtg
tttttatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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